Language selection

Search

2021 DFO Pacific Science Publications

We are pleased to continue to provide Canadians with the Pacific Region's science publications, and to continue the ongoing communication of high quality research with this list of 2021 Pacific Science Publications. Below you will find primary and secondary peer reviewed publications published in 2021 which involve at least one DFO Science Branch author from the Pacific Region. The links provided to this research are hosted by third party publishers, as such journals may only be available in English.

Title Keywords
Anderson, S.C., P.R. Elsen, B.B. Hughes, R.K. Tonietto, M.C. Bletz, D.A. Gill, M.A. Holgerson, S.E. Kuebbing, C. McDonough MacKenzie, M.H. Meek, D. Veríssimo. 2021. Trends in ecology and conservation over eight decades. Frontiers in Ecology and the Environment. 19(5): 274–282. http://doi.org/10.1002/fee.2320. Ecology, conservation, culturomic analysis, evolution of ecology, ecological hypotheses and theories
Sobocinski, K.L. (2021). State of the Salish Sea. G. Broadhurst and N.J.K. Baloy (Contributing Eds.). Salish Sea Institute, Western Washington University. https://doi.org/10.25710/vfhb-3a69. Salish Sea, estuary, urbanization, climate change, cumulative effects, seascape, Puget Sound, Strait of Georgia, ecosystem, State of the Salish Sea
Furey NB, Bass AL, Miller KM, Li S, Lotto AG, Healy SJ, Drenner SM, Hinch SG. 2021 Infected juvenile salmon can experience increased predation during freshwater migration. R. Soc. Open Sci. 8: 201522. Predator–prey interactions, infectious haematopoietic necrosis virus, migratory culling, migration ecology, predation risk, disease ecology
McKenzie Jessica L., Araújo H. Andrés, Smith Jack L., Schluter Dolph and Devlin Robert H. 2021. Incomplete reproductive isolation and strong transcriptomic response to hybridization between sympatric sister species of salmon. Proc. R. Soc. B.288: 20203020. 20203020. http://doi.org/10.1098/rspb.2020.3020 Hybrid breakdown, heterosis, cytonuclear incompatibility, Chinook, Coho
Curtis LJF, Pearce CM, Hodes V, Nelson JC, Wasser C, Savery J, Therriault TW (2021) Mitigating non-indigenous species movements: effects of pressure washing intensity and duration on the removal of biofouling and mobile invertebrates from cultured Pacific oysters (Crassostrea gigas (Thunberg, 1793)). Management of Biological Invasions 12(3): 618–639, https://doi.org/10.3391/mbi.2021.12.3.07 Crabs, invasive tunicates, non-indigenous species management, pressure washing, shellfish aquaculture
Sutherland, B.J.G., John Candy, Kayla Mohns, Olivia Cornies, Kim Jonsen, Khai Le, Richard G. Gustafson, Krista M. Nichols, and Terry D. Beacham. 2021. Population structure of Eulachon Thaleichthys pacificus from northern California to Alaska using single nucleotide polymorphisms from direct amplicon sequencing. Canadian Journal of Fisheries and Aquatic Sciences 78: 78-89. Eulachon, Thaleichthys pacificus, population structure, single nucleotide polymorphisms, direct amplicon sequencing
Grant, S. C., Nener, J., MacDonald, B. L., Boldt, J. L., King, J., Patterson, D. A., ... & Wheeler, S. (2021). Canadian Fraser River sockeye salmon: A case study. Adaptive management of fisheries in response to climate change, 259. Fraser River, sockeye salmon, aboriginal communities, Canada's west coast economy, fisheries management
Beacham, T.D., Wallace, C.G., Jonsen, K., McIntosh, B., Candy, J.R., Horst, K., Lynch, C., Willis, D., Luedke, W., Kearey, L. and Rondeau, E.B. 2021. Parentage-based tagging combined with genetic stock identification is a cost-effective and viable replacement for coded-wire tagging in large-scale assessments of marine Chinook salmon fisheries in British Columbia, Canada. Evol. Applic. https://doi.org/10.1111/eva.13203 Chinook salmon, coded-wire tags, fishery management, genetic stock identification, genotyping by sequencing, parentage-based tagging
Wright, B. M., Deecke, V. B., Ellis, G. M., Trites, A. W., & Ford, J. K. B. (2021). Behavioral context of echolocation and prey-handling sounds produced by killer whales (Orcinus orca) during pursuit and capture of Pacific salmon (Oncorhynchus spp.). Marine Mammal WriScience, 37( 4), 1428– 1453. https://doi.org/10.1111/mms.12836 Resident killer whales, Orcinus orca, echolocation, acoustic biologging tags, prey-handling sounds
Chapman, Jacqueline M. and Kelly, Lisa A. and Teffer, Amy K. and Miller, Kristi M. and Cooke, Steven J. Disease ecology of wild fish: opportunities and challenges for linking infection metrics with behaviour, condition, and survival. 2021. Cdn. J. Fish & Aqu Sc. https://doi.org/10.1139/cjfas-2020-0315 Disease ecology, wild fish, epidemiology, aquatic sciences, fisheries, aquatic ecosystems
Teffer, A. K., Hinch, S. G., Miller, K. M., Patterson, D. A., Bass, A. L., Cooke, S. J., Farrell, A. P., Beacham, T. D., Chapman, J. M., & Juanes, F. (2022). Host-pathogen-environment interactions predict survival outcomes of adult sockeye salmon (Oncorhynchus nerka) released from fisheries. Molecular Ecology, 31, 134– 160. https://doi.org/10.1111/mec.16214. Fisheries, gene expression, infectious agents, Oncorhynchus nerka, stress, temperature
Chapman, J. M., Lennox, R. J., Twardek, W. M., Teffer, A. K., Robertson, M. J., Miller, K. M., & Cooke, S. J. (2021). Serial sampling reveals temperature associated response in transcription profiles and shifts in condition and infectious agent communities in wild Atlantic salmon. Freshw Biol, 66, 2086– 2104. https://doi.org/10.1111/fwb.13817 Climate change, disease ecology, fisheries, gene expression, migration
Bateman, A.W., Schulze, A.D., Kaukinen, K.H. et al. Descriptive multi-agent epidemiology via molecular screening on Atlantic salmon farms in the northeast Pacific Ocean. Sci Rep 11, 3466 (2021). https://doi.org/10.1038/s41598-020-78978-9 Assay systems, ecological epidemiology, infectious-disease diagnostics, pathogens, Atlantic salmon, molecular screening
Mordecai, G.J., Miller, K.M., Bass, A.L., Bateman, A.W., Teffer, A.K., Caleta, J.M., Di Cicco, E., Schulze, A.D., Kaukinen, K.H., Li, S., Tabata, A., Jones, B.R., Ming, T.J., and Joy, J.B. 2021. Aquaculture mediates global transmission of a viral pathogen to wild salmon. Science Advances. https://doi.org/10.1126/sciadv.abe2592 Aquaculture, wild salmon, pathogen, global transmission, aquacultural transmission, infectious agent, PRV-1
Anderson, S.C., Mulberry, N., Edwards, A.M., Stockdale, J.E., Iyaniwura, S.A., Falcao, R.C., Otterstatter, M.C., Janjua, N.Z., Coombs, D., and Colijn, C. 2021. How much leeway is there to relax COVID-19 control measures? Epidemics. 35:100453. https://doi.org/10.1016/j.epidem.2021.100453 Epidemiology, COVID-19, control measures, immunity, Bayesian epidemiological model, transmission
Petrou, E. L., Fuentes-Pardo, A. P., Rogers, L. A., Orobko, M., Tarpey, C., Jiménez-Hidalgo, I., Moss, M. L., Yang, D., Pitcher, T. J., Sandell, T., Lowry, D., Ruzzante, D. E., & Hauser, L. (2021). Functional genetic diversity in an exploited marine species and its relevance to fisheries management. Proceedings. Biological sciences, 288(1945), 20202398. https://doi.org/10.1098/rspb.2020.2398 Phenology, population genomics, isolation by time, resource wave, Pacific herring
Jones C, Rooper CN, Wilson CW, Spencer P, Hanselman D, Wilborn RE. 2021. Estimates of Availability and Catchability for Select Rockfish Species Based on Acoustic-Optic Surveys in the Gulf of Alaska. Fisheries Research 236:105848 Catchability, q, availability, rockfish, lowered stereo camera, trawlable, untrawlable
Rooper CN, MacNeill S, Lee L, McNeil D, Yamanaka KL, Williams K, Towler RH. 2021. Stereo camera survey methodology for estimating density and size of Northern Abalone (Haliotis kamtschatkana). J. Shellfish Res. 40(2): 311-324. Haliotis kamtschatkana, survey methods, underwater cameras, northern abalone, British Columbia, habitat
Guthridge J, Rooper CN. 2021. Genetic evidence from embryos suggests a new species of skate related to Bathyraja parmifera (Rajiformes: Arhynchobatidae) in the Bering Sea. Mar Ecol Prog Ser. 670:155-166. Elasmobranch, speciation, genetic identification, skate
Anderson, E.D., King, J.R. and Zubkowski, T.B. 2021. Ecosystem-Based Juvenile Pacific Salmon (Oncorhynchus spp.) Trawl Survey off North East Vancouver Island, British Columbia, September 30 - October 8, 2019. Can. Data Rep. Fish. Aquat. Sci. 1335: vi + 39 p. Juvenile Pacific salmon, Oncorhynchus, trawl survey, Vancouver Island
McKinnell, S., & Irvine, J. R. (2021). Phenology and Fraser River sockeye salmon marine survival. Progress in Oceanography, 197, 102632. Chlorophyll, Queen Charlotte Sound, ocean productivity, smolt migration timing, pulse model, sockeye salmon
Long A, Jones SRM (2021) Piscirickettsia salmonis shedding and tissue burden, and hematological responses during cohabitation infections in chum Oncorhynchus keta, pink O. gorbuscha and Atlantic salmon Salmo salar. PLoS ONE 16(3): e0248098. http://doi.org/10.1371/journal.pone.0248098 Piscirickettsia salmonis, cohabitation infection, Chum salmon, Oncorhynchus keta, Pink salmon, Oncorhynchus gorbuscha, Atlantic salmon, Salmo salar, Salmonid reckettsial septicemia, marine-farmed salmonids, water-borne bacterium
Venello, T. A., Sastri, A. R., Galbraith, M. D., & Dower, J. F. (2021). Zooplankton functional group responses to environmental drivers off the west coast of vancouver island, canada. Progress in Oceanography, 190. https://doi.org/10.1016/j.pocean.2020.102482 Marine zooplankton, functional traits, biomass anomalies, functional group diversity
Ross, P. S., Chastain, S., Vassilenko, E., Etemadifar, A., Zimmermann, S., Quesnel, S. A., Eert, J., Solomon, E., Patankar, S., Posacka, A. M., & Williams, B. (2021). Pervasive distribution of polyester fibres in the Arctic Ocean is driven by Atlantic inputs. Nature communications, 12(1), 106. https://doi.org/10.1038/s41467-020-20347-1 Environmental monitoring, Ocean sciences, Marine chemistry
Nielsen, J. M., Rogers, L. A., Brodeur, R. D., Thompson, A. R., Auth, T. D., Deary, A. L., Duffy‐Anderson, J. T., Galbraith, M., Koslow, J. A., & Perry, R. I. (2021). Responses of ichthyoplankton assemblages to the recent marine heatwave and previous climate fluctuations in several northeast pacific marine ecosystems. Global Change Biology, 27(3), 506-520. https://doi.org/10.1111/gcb.15415 California Current, climate change, fish larvae, Gulf of Alaska, ichthyoplankton, marine heatwave, Pacific Ocean
Zhao, P., Han, X., & Wan, D. (2021). Evaluation of the airport ferry vehicle scheduling based on network maximum flow model? Omega (Oxford), 99. https://doi.org/10.1016/j.omega.2019.102178 Ferry vehicle, sharing network, network maximum flow
Hyatt, K.D., McQueen, D.J., Ogden, A.D., Benson, R., Yaniw, N., Mathieu, C., Stockwell, M.M., Wiens, L., and Wright, H. 2021. Methods, Summary Data (2014- 2017), and Errata (2005-2013) for Limnology and Food Web Structure in Skaha Lake, B.C. Can. Data Rep. Fish. Aquat. Sci. 1327: viii + 61 p. Okanagan Sockeye Salmon, Skaha Lake, limnological conditions, kokanee salmon, juvenile Sockey Salmon, nerkids, Mysis relicta, zooplankton, stocked age-0
Venney, C. J., Sutherland, B. J. G., Beacham, T. D., & Heath, D. D. (2021). Population differences in chinook salmon (Oncorhynchus tshawytscha) DNA methylation: Genetic drift and environmental factors. Ecology and Evolution, 11(11), 6846-6861. https://doi.org/10.1002/ece3.7531 Adaptive potential, DNA methylation, epigenetics, genetic drift, population genetics, population variation
Quinn, Thomas P., George R. Pess, Ben J. G. Sutherland, Samuel J. Brenkman, Ruth E. Withler, Kelsey Flynn, and Terry D. Beacham. 2021. Resumption of anadromy or colonization from afar? Sources of sockeye salmon Oncorhynchus nerka in the Elwha River after dam removal. Transactions of the American Fisheries Society 150: 462-474. Sockeye salmon, Elwha River, Anadromy, Washington, Orcorhynchus nerka, colonization
Gao, H., Zhao, H., Han, G., & Dong, C. (2021). Spatio-temporal variations of winter phytoplankton blooms northwest of the luzon island in the south china sea. Frontiers in Marine Science, 8. https://doi.org/10.3389/fmars.2021.637499 Winter phytoplankton blooms, upwelling, Ekman transport, temperature, advection effect
English, P. A., Ward, E. J., Rooper, C. N., Forrest, R. E., Rogers, L. A., Hunter, K. L., Edwards, A. M., Connors, B. M., & Anderson, S. C. (2022). Contrasting climate velocity impacts in warm and cool locations show that effects of marine warming are worse in already warmer temperate waters. Fish and Fisheries, 23, 239– 255. https://doi.org/10.1111/faf.12613 Biotic velocity, climate change, context-dependent, dissolved oxygen, groundfish, spatio- temporal distribution models
Huang, A-M., Pestal, G., Guthrie, I. 2021. Recovery Potential Assessment for Fraser River Sockeye Salmon (Oncorhynchus nerka) - Nine Designatable Units: Probability of Achieving Recovery Targets - Elements 12, 13, 15, 19-22. DFO Can. Sci. Advis. Sec. Res. Doc. 2021/043. x + 96. Sockeye salmon, Fraser River, Oncorhynchus nerka, British Columbia, Designatable Units (DUs), Endagered (EN), Threatened (TH)
Kassem, H.; Sutherland, T.F., and Amos, C.L., 2021. Hydrodynamic controls on the particle size of resuspended sediment from sandy and muddy substrates in British Columbia, Canada. Journal of Coastal Research, 37(4), 691–707. Coconut Creek (Florida), ISSN 0749-0208. Erodibility, flocculation, Roughness, sediment, Suspension, turbulence dissipation
Jackson, J. M., Bianucci, L., Hannah, C. G., Carmack, E. C., & Barrette, J. (2021). Deep waters in british Columbia mainland fjords show rapid warming and deoxygenation from 1951 to 2020. Geophysical Research Letters, 48, e2020GL091094. https://doi.org/10.1029/2020GL091094 British Columbia, deoxygenetation, fjord, inlet, time series, warming
Parada, C., Ernst, B., Cornejo‐Guzmán, S., Santa Cruz, F., Sandoval Belmar, M., Rivara, P., Tapia, B., Gauthier, S., Pino‐Aguilera, J., Escribano, R., & Morales, C. E. (2021). Local and remote physical processes driving variability of the planktonic system in the juan fernández archipelago: A multidisciplinary framework providing conservation insights. Aquatic Conservation, 31(2), 253-272. https://doi.org/10.1002/aqc.3499 Archipelago, ecosystem approach, island, marine protected area, phytoplankton, zooplankton
Perry, R.I., Young, K., Galbraith, M., Chandler, P., Velez-Espino, A., Baillie, S. (2021). Zooplankton variability in the Strait of Georgia, Canada, and relationships with the marine survivals of Chinook and Coho salmon. PLoS ONE 16(1): e0245941. https://doi.org/10.1371/journal.pone.0245941 Zooplankton, Strait of Georgia, Chinook salmon, Coho salmon, zooplankton biomass, salmon marine survival
Del Bel Belluz, J., Peña, M. A., Jackson, J. M., & Nemcek, N. (2021). Phytoplankton composition and environmental drivers in the northern strait of georgia (salish sea), british columbia, canada. Estuaries and Coasts, 44(5), 1419-1439. https://doi.org/10.1007/s12237-020-00858-2 Chemtax, phytoplankton dynamics, environmental drivers, pico-flagellates, Prasinophytes, Salish Sea
Heidarzadeh, M., Rabinovich, A.B. Combined hazard of typhoon-generated meteorological tsunamis and storm surges along the coast of Japan. Nat Hazards 106, 1639–1672 (2021). https://doi.org/10.1007/s11069-020-04448-0 Meteotsunami, storm surges, typhoon, tide gauge records, seiches, harbour oscillations, statistics, tsunami currents
Le Corre, N, Pepin, P, Han, G, Ma, Z. Potential impact of climate change on northern shrimp habitats and connectivity on the Newfoundland and Labrador continental shelves. Fish Oceanogr. 2021; 30: 331– 347. https://doi.org/10.1111/fog.12524 Climate change, connectivity, larval dispersal, metapopulation, Pandalus, thermal habitat
He, X., Gilmore, S.R., Sutherland, T.F., Hajibabaei, M., Miller, K.M., Westfall, K.M., Pawlowski, J. and Abbott, C.L. (2021), Biotic signals associated with benthic impacts of salmon farms from eDNA metabarcoding of sediments. Mol Ecol, 30: 3158-3174. https://doi.org/10.1111/mec.15814 Benthic assessment, bioindicator, Capitella, morphotaxonomy, Nematoda, Polychaeta
Chalifour, L., Scott, D.C., MacDuffee, M., Stark, S., Dower, J.F., Beacham, T.D., Martin, T.G., Baum, J.K. (2021). Chinook salmon exhibit long-term rearing and early marine growth in the Fraser River, British Columbia, a large urban estuary. Canadian Journal of Fisheries and Aquatic Sciences. 78(5): 539-550. https://doi.org/10.1139/cjfas-2020-0247 Chinook salmon, Fraser River, British Columbia, salmon migration, transition zone, freshwater, marine water, estuarine habitat, Oncorhynchus tshawytcha, otolith analysis
Tseng, M, Di Filippo, CM, Fung, M, Kim, JO, Forster, IP, Zhou, Y. Cascading effects of algal warming in a freshwater community. Funct Ecol. 2021; 35: 920– 929. https://doi.org/10.1111/1365-2435.13752 Algae, consumer, Daphnia, fatty acids, predator, resource, Scenedesmus, temperature
Araujo, H. A., Duguid, W. D. P., Withler, R., Supernault, J., Schulze, A. D., Mckenzie, J. L., Pellett, K., Beacham, T. D., Jonsen, K., & Gummer, A. (2021). Chinook and Coho salmon hybrids linked to habitat and climatic changes on Vancouver Island, British Columbia. Ecology and Evolution, 11, 16874– 16889. https://doi.org/10.1002/ece3.8322 Climate change, Cowichan River, hybridization, introgression, reproductive viability, salmonids, Strait of Georgia
Johannessen, S.C., Macdonald, R.W., Strivens, J.E. (2021) Has primary production declined in the Salish Sea?. Canadian Journal of Fisheries and Aquatic Sciences. 78(3): 312-321. https://doi.org/10.1139/cjfas-2020-0115 Salish Sea, primary production, Coho salmon, Oncorhynchus kisutch, Chinook salmon, Oncorhynchus tshawytscha, marine-derived organic matter, marine flux, population decline
Polinski MP, Laurin E, Delphino MKVC, Lowe GJ, Meyer GR, Abbott CL (2021) Evaluation of histopathology, PCR, and qPCR to detect Mikrocytos mackini in oysters Crassostrea gigas using Bayesian latent class analysis. Dis Aquat Org 144:21-31. https://doi.org/10.3354/dao03566 Mikrocytos mackini, Oyster parasite, Diagnostic test evaluation, Crassostrea gigas, Quantitative PCR, Bayesian latent class analysis
Howard BR, Wong DTS, Aguiar V, Desforges J, Oishi EM, Stewart J, Côté IM (2022) Effects of perceived competition and water temperature on the functional responses of invasive and native crabs. Mar Ecol Prog Ser 684:69-78. https://doi.org/10.3354/meps13974 Non-native species, Comparative functional response analysis, CFRA, Resource use, Impact prediction, Population stability, Climate change
Niemi, A., Bednarsek, N., Michel, C., Feely, R. A., Williams, W., Azetsu-Scott, K., Walkusz, W., & Reist, J. D. (2021). Biological impact of ocean acidification in the canadian arctic: Widespread severe pteropod shell dissolution in amundsen gulf. Frontiers in Marine Science, 8. https://doi.org/10.3389/fmars.2021.600184 Arctic, pteropods, Limacina helicina, ocean acidification, life history, sea ice
Frid, A., McGreer, M., Wilson, K.L. et al. Hotspots for rockfishes, structural corals, and large-bodied sponges along the central coast of Pacific Canada. Sci Rep 11, 21944 (2021). Biodiversity, conservation biology, marine biology
Holdsworth A.M., Zhai, L., Lu, Y., Christian, J.R. (2021) Future Changes in Oceanography and Biogeochemistry Along the Canadian Pacific Continental Margin. Front. Mar. Sci. 8:602991. doi: 10.3389/fmars.2021.602991 Modeling, biogeochemistry, acidification, deoxygenation, Pacific ocean, projection, climate-change
Vilibić, I., Rabinovich, A.B. & Anderson, E.J. Special issue on the global perspective on meteotsunami science: editorial. Nat Hazards 106, 1087–1104 (2021). https://doi.org/10.1007/s11069-021-04679-9 Extreme sea levels, coastal communities, flooding, coastal regions, tsunamis, meteotsunamis, meteorological tsunamis
Curtis, L.F., Swan, K.D., and Lessard, J. 2021. Northern Abalone, Haliotis kamtschatkana, juvenile sampling techniques: A summary of methods tested in the Broken Group Islands, Barkley Sound, British Columbia. Can. Tech. Rep. Fish. Aquat. Sci. 3420: x + 53 p. Northern Abalone, Haliotis kamtschatkana, sampling methods, species at risk
Ricciardi, A., Iacarella, J.C., Aldridge, D.C., Blackburn, T.M., Carlton, J.T., Catford, J.A., Dick, J.T.A., Hulme, P.E., Jeschke, J.M., Liebhold, A.M., Lockwood, J.L., MacIsaac, H.J., Meyerson, L.A., Pyšek, P., Richardson, D.M., Ruiz, G.M., Simberloff, D., Vilà, M., and Wardle, D.A. Four priority areas to advance invasion science in the face of rapid environmental change. Environmental Reviews. 29(2): 119-141. https://doi.org/10.1139/er-2020-0088 Biodiversity, biosecurity, invasion science, non-native species
King, J., T. Beacham, C. Deeg, C. Freshwater, S. Grant, C. Holt, J. Irvine, and K. Miller-Saunders. 2021. Canadian 2021 research relevant to the 2016-2022 NPAFC Science Plan. NPAFC Doc. 1945. 7 pp. Fisheries and Oceans Canada, and University of British Columbia (Available at https://npafc.org). Pacific salmon, research, Canada, NPAFC Science Plan
Love, M. S., Bizzarro, J. J., Cornthwaite, A. M., Frable, B. W., & Maslenikov, K. P. (2021). Checklist of marine and estuarine fishes from the Alaska–Yukon border, beaufort sea, to cabo san lucas, mexico. Zootaxa, 5053(1), 1. https://doi.org/10.11646/ZOOTAXA.5053.1.1 Eastern North Pacific Ocean, taxonomy, species inventory
Westfall KM, Therriault TW, Abbott CL (2021). Targeted Next Generation Sequencing of environmental DNA improves detection and quantification of invasive European green crab (Carcinus maenas). Environmental DNA 00:1–13. CPUE, detection probability, invasive species, invertebrate, marine eDNA, qPCR
Grant, S.C.H, B.L. MacDonald, D. Lewis, N. Wilson, J.L. Boldt, J. King, T. Ross, R.I. Perry, D.A. Patterson, K.A. Robinson. D.T. Selbie, C.G. Hannah, and A. Velez-Espino. 2021. Canada's 2020 report on recent Pacific salmon abundance and ecosystem trends. NPAFC Doc. 1984. 9 pp. Fisheries and Oceans Canada. Canadian Pacific Salmon, climate change, habitat change
Grant, S.C.H., T.D. Beacham, B.M. Connors, S.G. Hinch, C. Holt, J.R. Irvine, and J.R. King. 2021. Canadian bibliography of recent publications linked to the 2016–2022 NPAFC Science Plan. NPAFC Doc. 1942. 15 pp. Fisheries and Oceans Canada, and University of British Columbia. Salmon, steelhead, bibliography, Canada, NPAFC Science Plan
Hyatt, K.D., McQueen, D.J., Ogden, A.D., Benson, R. and Wright, H. (2021), Age-Structured Interactions among Reintroduced Sockeye Salmon, Resident Kokanee, Invasive Mysids, and their Zooplankton Prey in Skaha Lake, British Columbia. North Am J Fish Manage, 41: 1246-1273. https://doi.org/10.1002/nafm.10635 Sockeye Salmon, Oncorhynchus nerka, Skaha Lake, Mysis diluviana, zooplankton prey, kokanee
Bradford, M.J., Thompson, A.S., and Taylor, G.C. 2021. Migration and distribution of juvenile Chinook Salmon in the Nechako River, British Columbia, 1996. Can. Manuscr. Rep. Fish. Aquat. Sci. 3216:iv + 70 p. Chinook salmon, Oncorhynchus tshawytscha, juvenile migration, Nechako River, Stuart River
Beacham, T.D., Jonsen, K., Sutherland, B.J.G., Lynch, C., and Rondeau, E.B. 2022. Assessment of mixed-stock fisheries and hatchery broodstocks for coho salmon in British Columbia, Canada via parentage-based tagging and genetic stock identification. Fish. Res. 245(17):106136. DOI: 10.1016/j.fishres.2021.106136 Amplicon sequencing, fishery management, genetic stock identification mixed-stock fishery, parentage-based tagging, Salmonids
Adams, M.S., Connors, B., Levi, T., Shaw, D., Walkus, J., Rogers, S. and Darimont, C. (2021), Local Values and Data Empower Culturally Guided Ecosystem-Based Fisheries Management of the Wuikinuxv Bear–Salmon–Human System. Mar Coast Fish, 13: 362-378. https://doi.org/10.1002/mcf2.10171 Fisheries management, Culturally Guided Ecosystem, salmon, ecosystem-based fisheries management (EBFM), Indigenous fishery harvest, Grizzly bears, Ursus arctos horribilis, Wuikinuxv First Nation, Rivers Inlet
Nielsen, M. L. K., Ellis, S., Towers, J. R., Doniol‐Valcroze, T., Franks, D. W., Cant, M. A., ... & Croft, D. P. (2021). A long postreproductive life span is a shared trait among genetically distinct killer whale populations. Ecology and evolution, 11(13), 9123-9136. Kinship dynamics, postreproductive life span, menopause, Orcinus orca
McMillan, A.K.L., Lecomte, J-B. and Hunter, K.L. 2021. Species distribution and temperature range of select Pacific groundfish species occuring in Queen Charlotte Sound and Hecate Strait, British Columbia. Can. Tech. Rep. Fish. Aquat. Sci. 3426: iv + 66p. Species distribution models, Poisson-Gamma distribution, trawl biomass, Bayesian hierarchical model
Friesen, S.K., Ban, N.C., Holdsworth, A.M., Peña, M.A., Christian, J. and Hunter, K.L. 2021. Physical Impacts of Projected Climate Change Within Marine Protected Areas in the Pacific Bioregions. Can. Tech. Rep. Fish. Aquat. Sci. 3422: iv +60 p. Marine protected areas, marine ecosystems, climate change, Representative Concentration Pathway
Wilborn, R.E., Goddard, P., Wilborn, M.M. II (illus.), Best, M., and Rooper, C.N.. 2021. Field Guide to Corals of British Columbia, Canada, Alaska, USA, and the eastern North Pacific Ocean (Anthozoa: Octocorallia and Hexacorallia) (Hydrozoa: Anthoathecata). A complete compilation of coral identifications for the eastern North Pacific Ocean. Can. Tech. Rep. Fish. Aquat. Sci. 3433: xi + 123 p. Marine, coral, identification, species identification, taxonomy, vertical distribution, geographical distribution, animal morphology, Canada, British Columbia, Alaska, USA, North Pacific
Bates, A., R. B. Primack, PAN-Environment Working Group, and C. M. Duarte. 2021. Global COVID-19 lockdown highlights humans as both threats and custodians of the environment. Biological Conservation. 101917. Pandemic, biodiversity, restoration, global monitoring
Polinski, M.P., Zhang, Y., Morrison, P.R. et al. Innate antiviral defense demonstrates high energetic efficiency in a bony fish. BMC Biol 19, 138 (2021). https://doi.org/10.1186/s12915-021-01069-2 Salmon, Piscine orthoreovirus (PRV), Infectious hematopoietic necrosis virus (IHNV), Respiratory performance, Innate immunity, Acute stress
Boldt, J.L., Hazen, E.L., Hunsicker, M.E., Fu, C., Perry, R.I., Shan,X. Quantifying ecosystem responses to environmental and human pressures in the marine ecosystem off the west coast of Vancouver Island, Ecological Indicators, Volume 132, 2021, 108232, ISSN 1470-160X, https://doi.org/10.1016/j.ecolind.2021.108232 Ecosystem indicators, Marine ecosystems, Reference points, Northeast Pacific, Non-linear response, Multi-model approach
Bach, L.T., Tamsitt, V., Gower, J. et al. Testing the climate intervention potential of ocean afforestation using the Great Atlantic Sargassum Belt. Nat Commun 12, 2556 (2021). https://doi.org/10.1038/s41467-021-22837-2 Carbon cycle, marine biology, ocean sciences
Lüskow F, Galbraith MD, Hunt BPV, Perry RI, Pakhomov EA (2021) Gelatinous and soft-bodied zooplankton in the Northeast Pacific Ocean: organic, elemental, and energy contents. Mar Ecol Prog Ser 665:19-35. https://doi.org/10.3354/meps13663 Subarctic Pacific, Jellyfish, Elemental composition, Salish Sea, Ctenophore, Energy content, Salp, Doliolid, Pteropod, Heteropod
Morrison, C.M., Gallagher, C.P., Tierney, K.B. et al. Freshwater early life growth influences partial migration in populations of Dolly Varden (Salvelinus malma malma). Polar Biol 44, 1353–1364 (2021). https://doi.org/10.1007/s00300-021-02870-z Dolly Varden, Salvelinus malma malma, Resident, Anadromy, Life-history, Partial-migration, Otolith, back-calculation, Otolith-microchemistry, Growth
Paull, C. K., Dallimore, S. R., Caress, D. W., Gwiazda, R., Lundsten, E., Anderson, K., Melling, H., Jin, Y. K., Duchesne, M. J., Kang, S. -., Kim, S., Riedel, M., King, E. L., & Lorenson, T. (2021). A 100-km wide slump along the upper slope of the canadian arctic was likely preconditioned for failure by brackish pore water flushing. Marine Geology, 435, 106453. https://doi.org/10.1016/j.margeo.2021.106453 Submarine slope failures, Continental margin morphology, Cold venting process and products, Artic Ocean, Autonomous Underwater Vehicles
Schreiber, L., Fortin, N., Tremblay, J., Wasserscheid, J., Sanschagrin, S., Mason, J., Wright, C. A., Spear, D., Johannessen, S. C., Robinson, B., King, T., Lee, K., & Greer, C. W. (2021). In situ microcosms deployed at the coast of british columbia (canada) to study dilbit weathering and associated microbial communities under marine conditions. FEMS Microbiology Ecology, 97(7), 1. https://doi.org/10.1093/femsec/fiab082 Dilbit, oil biodegradation, Douglas Channel, Hecate Strait, in situ microcosms
Ens, N.J., Lim, E.G., Howard, B.R. et al. A comparison of the predatory impacts of an invasive and native crab species using a functional response approach. Biol Invasions 23, 2329–2336 (2021). https://doi.org/10.1007/s10530-021-02508-5 European green grab, Pacific oyster, Aquaculture, Carcinus maenas, Cancer productus, Crassostrea gigas
Anderson, E.D., Tabata, A.M., Zubkowski, T.B., and King, J.R. 2021. Juvenile Pacific Salmon (Oncorhynchus spp.) Trawl Survey on the South Coast of British Columbia, July 10-20, 2015. Can. Data Rep. Fish. Aquat. Sci. 1340: vi + 38 p. Juvenile Pacific Salmon, genetic stock composition, physical oceanography, zooplankton
Yamada, S. B., Gillespie, G. E., Thomson, R. E., & Norgard, T. C. (2021). Ocean indicators predict range expansion of an introduced species: Invasion history of the european green crab Carcinus maenas on the north american pacific coast. Journal of Shellfish Research, 40(2), 399-413. https://doi.org/10.2983/035.040.0212 European green crab, Carcinus maenas, range expansion, Davidson Current, El Niño, Pacific Decadal Oscillation, invasive species
Ahmed, M. M. M., Else, B. G. T., Butterworth, B., Capelle, D. W., Guéguen, C., Miller, L. A., Meilleur, C., & Papakyriakou, T. (2021). Widespread surface water pCO2 undersaturation during ice-melt season in an arctic continental shelf sea (hudson bay, canada). Elementa (Washington, D.C.), 9(1). https://doi.org/10.1525/elementa.2020.00130 Artic shelves, Hudson Bay, pCO2, Sea-air CO2 fluxes, Sea-ice melt, Marine carbon sink
Bessell-Browne, P., Epstein, H. E., Hall, N., Buerger, P., & Berry, K. (2021). Severe Heat Stress Resulted in High Coral Mortality on Maldivian Reefs following the 2015–2016 El Niño Event. Oceans, 2(1), 233–245. https://doi.org/10.3390/oceans2010014 Maldives, Indian Ocean, El Niño, mass coral bleaching, coral mortality, benthic cover
Burnham, R. E., Vagle, S., & O'Neill, C. (2021). Spatiotemporal patterns in the natural and anthropogenic additions to the soundscape in parts of the salish sea, british columbia, 2018–2020. Marine Pollution Bulletin, 170, 112647-112647. https://doi.org/10.1016/j.marpolbul.2021.112647 Acoustic monitoring, scondscape characterisation, vessel noise, marine habitat quality
Duke, P. J., Else, B. G. T., Jones, S. F., Marriot, S., Ahmed, M. M. M., Nandan, Butterworth, B., Gonski, S. F., Dewey, R., Sastri, A., Miller, L. A., Simpson, K. G., & Thomas, H. (2021). Seasonal marine carbon system processes in an arctic coastal landfast sea ice environment observed with an innovative underwater sensor platform. Elementa (Washington, D.C.), 9(1). https://doi.org/10.1525/elementa.2021.00103 Biochemistry, Carbon cycle, Ocean acidification, Gas exchange, Sea ice, Chemical sensors
Evans, R., English, P. A., Anderson, S. C., Gauthier, S., & Robinson, C. L. K. (2021). Factors affecting the seasonal distribution and biomass of E. pacifica and T. spinifera along the pacific coast of canada: A spatiotemporal modelling approach. PloS One, 16(5), e0249818-e0249818. https://doi.org/10.1371/journal.pone.0249818 Seasonal trends, Euphasia pacifica, Thysanoessa spinifera, euphausiid, north-east Pacific Ocean, Vancouver Island, larval distrubution, biomass
Franco, A. C., Ianson, D., Ross, T., Hamme, R. C., Monahan, A. H., Christian, J. R., Davelaar, M., Johnson, W. K., Miller, L. A., Robert, M., & Tortell, P. D. (2021). Anthropogenic and climatic contributions to observed carbon system trends in the northeast pacific. Global Biogeochemical Cycles, 35(7), n/a. https://doi.org/10.1029/2020GB006829 Ocean acidification, climate change, long-term time series, anthropogenic carbon, lunar nodal cycle, Line P
Howatt, T., Waterman, S., & Ross, T. (2021). On using the finescale parameterization and thorpe scales to estimate turbulence from glider data. Journal of Atmospheric and Oceanic Technology, 38(6), 1187-1204. https://doi.org/10.1175/JTECH-D-20-0144.1 Ocean, continential shelf/ slope, in situ oceanic observations, turbulence, parameterization
Li, F., Lozier, M.S., Bacon, S. et al. Subpolar North Atlantic western boundary density anomalies and the Meridional Overturning Circulation. Nat Commun 12, 3002 (2021). https://doi.org/10.1038/s41467-021-23350-2 Density anomalies, Meridional Overturning Circulation, Subpolar North Atlantic, subpolar region, overturning variability
Li, X., Yang, D., Yang, J., Han, G., Zheng, G., & Li, W. (2021). Validation of NOAA CyGNSS wind speed product with the CCMP data. Remote Sensing (Basel, Switzerland), 13(9), 1832. https://doi.org/10.3390/rs13091832 Sea surface wind speed, global satellite navigation system reflectometry (GNSS-R), validation
McKenzie, C. H., Bates, S. S., Martin, J. L., Haigh, N., Howland, K. L., Lewis, N. I., Locke, A., Peña, A., Poulin, M., Rochon, A., Rourke, W. A., Scarratt, M. G., Starr, M., & Wells, T. (2021;2020;). Three decades of canadian marine harmful algal events: Phytoplankton and phycotoxins of concern to human and ecosystem health. Harmful Algae, 102, 101852-101852. https://doi.org/10.1016/j.hal.2020.101852 Phycotoxin, harmful algal event, Saxitoxin, Domoic acid, Okadaic acid, Harmful Algal Event Database (HAEDAT), Alexandrium, Pseudo-nitzschia, Dinophysis, Chaetoceros, Heterosigma, Northeast Pacific, Northwest Atlantic, Artic Canada
Murray, C. C., Hannah, L. C., Doniol-Valcroze, T., Wright, B. M., Stredulinsky, E. H., Nelson, J. C., Locke, A., & Lacy, R. C. (2021). A cumulative effects model for population trajectories of resident killer whales in the northeast pacific. Biological Conservation, 257, 109124. https://doi.org/10.1016/j.biocon.2021.109124 Resident killer whale, cumulative effects, management, recovery, population viability analysis, pathways of effects
Rotermund, L. M., Williams, W. J., Klymak, J. M., Wu, Y., Scharien, R. K., & Haas, C. (2021). The effect of sea ice on tidal propagation in the Kitikmeot Sea, Canadian Arctic Archipelago. Journal of Geophysical Research: Oceans, 126, e2020JC016786. https://doi.org/10.1029/2020JC016786 Canadian Arctic Archipelago, Finite-Volume Community Ocean Model (FVCOM), Sea-ice roughness, Surface friction, Tidal damping
Smith, J. A. C., Galbraith, M., Young, K., Perry, R. I., Sastri, A., & Nelson, R. J. (2021). Acartia arbruta (previously A. tonsa) in british columbia: A bioindicator of climate-driven ecosystem variability in the northeast pacific ocean. Journal of Plankton Research, 43(4), 546-564. https://doi.org/10.1093/plankt/fbab040 Acartia tonsa; genetics; COI; 16S; bioindicator; cryptic species; Pacific Decadal Oscillation; copepods; zooplankton; climate change
Thomson, R. E., & Fine, I. V. (2021). Revisiting the Ocean's Nonisostatic Response to 5-Day Atmospheric Loading: New Results Based on Global Bottom Pressure Records and Numerical Modeling, Journal of Physical Oceanography, 51(9), 2845-2859. Retrieved Jun 30, 2022, from https://journals.ametsoc.org/view/journals/phoc/51/9/JPO-D-21-0025.1.xml Atmosphere-ocean interaction; Barotropic flows; Inertia-gravity waves; Kelvin waves; Ocean dynamics; Planetary waves; Pressure; Rossby waves; Abyssal circulation; Sea level; Ocean models
Boldt, J.L., Javorski, A., and Chandler, P.C. (Eds.). 2021. State of the physical, biological and selected fishery of Pacific Canadian marine ecosystems in 2020. Can. Tech. Rep. Fish. Aquat. Sci. 3434: vii + 231 p. Climate change, ecosystem nutrient concentrations, State of the Pacific Ocean meeting, North Pacific marine ecosystems
Edge, D. C., Reynolds, D. J., Wanamaker, A. D., Griffin, D., Bureau, D., Outridge, C., Stevick, B. C., Weng, R., & Black, B. A. (2021). A multicentennial proxy record of northeast pacific sea surface temperatures from the annual growth increments of panopea generosa. Paleoceanography and Paleoclimatology, 36(9), n/a. https://doi.org/10.1029/2021PA004291 Sclerochronology, chronology, development, sea surface temperatures (SST), reconstruction, Northeast Pacific
Li, X., Yang, D., Han, G., Yang, L., Wang, J., Yang, J., Chen, D., & Zheng, G. (2021). Exploiting the potential of coastal GNSS-R for improving storm surge modeling. IEEE Geoscience and Remote Sensing Letters, 18(7), 1134-1138. https://doi.org/10.1109/LGRS.2020.2996415 Tropical cyclones, sea measurements, wind speed, storms surges, oceans
Christensen, K. A., Rondeau, E. B., Sakhrani, D., Biagi, C. A., Johnson, H., Joshi, J., Flores, A., Leelakumari, S., Moore, R., Pandoh, P. K., Withler, R. E., Beacham, T. D., Leggatt, R. A., Tarpey, C. M., Seeb, L. W., Seeb, J. E., Jones, S. J. M., Devlin, R. H., & Koop, B. F. (2021). The pink salmon genome: Uncovering the genomic consequences of a two-year life cycle. PloS One, 16(12), e0255752-e0255752. https://doi.org/10.1371/journal.pone.0255752 Genomics, Haplotypes, Centromeres, Heterozygosity, Genome analysis, Variant genotypes, Fish genomics, Mitochondria
O'Regan, S. M., Archer, S. K., Friesen, S. K., & Hunter, K. L. (2021). A Global Assessment of Climate Change Adaptation in Marine Protected Area Management Plans. Frontiers in Marine Science, 1155. Climate change robustness, text analysis, adaptive management, biodiversity conservation, monitoring, sea level rise
Ma, S., Liu, D., Tian, Y., Fu, C., Li, J., Ju, P., ... & Watanabe, Y. (2021). Critical transitions and ecological resilience of large marine ecosystems in the Northwestern Pacific in response to global warming. Global Change Biology, 27(20), 5310-5328. Critical transition, ecological resilience, integrated resilience assessment, large marine ecosystem, Northwestern Pacific, warming
McClelland, E.K., Breanna Watson, B., Sundström, L.F., Leggatt, R.A., Sakhrani, D., and Devlin, R.H. Assessing wild genetic background and parental effects on size of growth hormone transgenic coho salmon. Canadian Journal of Fisheries and Aquatic Sciences. 79(5): 803-813. https://doi.org/10.1139/cjfas-2021-0153 Wild genetic background, parental effects, transgenic, coho salmon, growth hormone (GH), transgenesis, Oncorhynchus kisutch, British Columbia
Hamilton, S. L., Saccomanno, V. R., Heady, W. N., Gehman, A. L., Lonhart, S. I., Beas-Luna, R., Francis, F. T., Lee, L., Rogers-Bennett, L., Salomon, A. K., & Gravem, S. A. (2021). Disease-driven mass mortality event leads to widespread extirpation and variable recovery potential of a marine predator across the eastern pacific. Proceedings.Biological Sciences, 288(1957), 20211195. https://doi.org/10.1098/rspb.2021.1195 Pycnopodia helianthoides, echinoderm, mass mortality event, sea star wasting disease, species distribution models, temperature
Iacarella, J. C., & Hou, Z. (2022). Fish zeta diversity responses to human pressures and cumulative effects across a freshwater basin. Diversity & Distributions, 28(4), 830-843. https://doi.org/10.1111/ddi.13486 Beta diversity, biotic homogenization, cumulative effects, freshwater fish, human pressures, nonlinear responses, species turnover, watersheds
Long A, LeBlanc F, Arseneau J-R, Gagne N, Einer-Jensen K, Lovy J, Polinski M, Jones S, Garver KA. Distribution and Pathogenicity of Two Cutthroat Trout Virus (CTV) Genotypes in Canada. Viruses. 2021; 13(9):1730. https://doi.org/10.3390/v13091730 Hepeviridae, Piscihepevirus, Cutthroat Trout Virus, CTV-2, Atlantic salmon, Pacific salmon, Hepatitis E virus
Friesen, S. K., Rubidge, E., Martone, R., Hunter, K. L., Peña, M. A., & Ban, N. C. (2021). Effects of changing ocean temperatures on ecological connectivity among marine protected areas in northern british columbia. Ocean & Coastal Management, 211, 105776. https://doi.org/10.1016/j.ocecoaman.2021.105776 Adult movement, Circuit theory, Climate change impact, Least cost theory, Population connectivity
Rosengard, SZ, Freshwater, C, McKinnell, S, Xu, Y, Tortell, PD. (2021). Covariability of Fraser River sockeye salmon productivity and phytoplankton biomass in the Gulf of Alaska. Fisheries Oceanography, 30( 6), 666– 678. https://doi.org/10.1111/fog.12544 Eddy, Gulf of Alaska, marine survival, Satellite chloryphyll a, sockeye salmon productivity
Freshwater C., S.C. Anderson, T.D. Beacham, W. Luedke, C. Wor, J. King. 2021. An integrated model of seasonal changes in stock composition and abundance with an application to Chinook salmon. PeerJ 9:e11163. https://doi.org/10.7717/peerj.11163. Seasonal trends, population composition, commercial and recreational Chinook salmon
Murauskas, J., Hyatt, K., Fryer, J. et al. Migration and survival of Okanagan River Sockeye Salmon Oncorhynchus nerka, 2012–2019. Anim Biotelemetry 9, 37 (2021). https://doi.org/10.1186/s40317-021-00262-y Sockeye Salmon, PIT tags, Columbia River Basin, Survival
Sutherland, T. F., Amos, C. L., & Grant, J. (2021;2022;). The resuspension and deposition of biomediated sediments in upper south cove, nova scotia, canada. Journal of Coastal Research, 38(1), 19-34. https://doi.org/10.2112/JCOASTRES-D-20-00104.1 Deposition, resuspension, biomediated sediments, benthic-pelagic coupling, shellfish aquaculture
Gregr EJ, Haggarty DR, Davies SC, Fields C, Lessard J (2021) Comprehensive marine substrate classification applied to Canada's Pacific shelf. PLoS ONE 16(10): e0259156. https://doi.org/10.1371/journal.pone.0259156 Deposition, resuspension, biomediated sediments, benthic-pelagic coupling, shellfish aquaculture
Watson, J., Joy, R., Tollit, D., Thornton, S. J., & Auger-Methe, M. (2021). estimating animal utilization distributions from multiple data types: A joint spatiotemporal point process framework. The Annals of Applied Statistics, 15(4), 1872-1896. https://doi.org/10.1214/21-AOAS1472 Citizen science, preferential sampling, spatiotemporal analysis, Species distribution models
Foster, E., Watson, J., Lemay, M. A., Tinker, M. T., Estes, J. A., Piercey, R., Henson, L., Ritland, C., Miscampbell, A., Nichol, L., Hessing-Lewis, M., Salomon, A. K., & Darimont, C. T. (2021). Physical disturbance by recovering sea otter populations increases eelgrass genetic diversity. Science (American Association for the Advancement of Science), 374(6565), 333-336. https://doi.org/10.1126/science.abf2343 Sea otters, physical disturbance, eelgrass genetic diversity, megafauna, ecological resilience
Carnegie, Ryan B.; Meyer, Gary M. (2021). Mikrocytosis of bivalve molluscs. ICES Identification Leaflets for Diseases and Parasites in Fish and Shellfish. Report. https://doi.org/10.17895/ices.pub.5439 Mikrocytosis, bivalve molluscs, Denman Island disease, oysters, protozoan parasite, Crassostrea gigas
Ward, E. J., Anderson, S. C., Hunsicker, M. E., & Litzow, M. A. (2022). Smoothed dynamic factor analysis for identifying trends in multivariate time series. Methods in Ecology and Evolution, 13, 908– 918. https://doi.org/10.1111/2041-210X.13788 Bayesian modelling, B-spline, dynamic factor analysis, Guassian process, smooth spline, Stan
Schweigert, J.F., and Haegele, C.W. 2021. Synopsis of the development of dive surveys for Pacific Herring spawn assessment. Can. Manuscr. Rep. Fish. Aquat. Sci. 3234: v + 21 p. Pacific herring, spawn assessment, Clupea pallasii, abundance, egg deposition, dive survey, spawning population abundance, herring abundance
Jackson, J.M., Johannessen, S., Del Bel Belluz, J. et al. Identification of a Seasonal Subsurface Oxygen Minimum in Rivers Inlet, British Columbia. Estuaries and Coasts 45, 754–771 (2022). https://doi.org/10.1007/s12237-021-00999-y British Columbia, fjord, surface oxygen minimum, upwelling, downwelling, remineralization
Lin, P., Pickart, R. S., Fissel, D. B., Borg, K., Melling, H., & Wiese, F. K. (2021). On the nature of wind-forced upwelling and downwelling in mackenzie canyon, beaufort sea. Progress in Oceanography, 198, 102674. https://doi.org/10.1016/j.pocean.2021.102674 Beaufort Sea, Mackenzie Canyon, upwelling, downwelling, water mass
Pnyushkov AV, Polyakov IV, Alekseev GV, Ashik IM, Baumann TM, Carmack EC, Ivanov VV and Rember R (2021) A Steady Regime of Volume and Heat Transports in the Eastern Arctic Ocean in the Early 21st Century. Front. Mar. Sci. 8:705608. doi: 10.3389/fmars.2021.705608 Transports, Arctic Ocean, moorings, boundary current, oceanographic observations
Halliday, W. D., Dawson, J., Yurkowski, D. J., Doniol-Valcroze, T., Ferguson, S. H., Gjerdrum, C., ... & Wong, S. N. (2022). Vessel risks to marine wildlife in the Tallurutiup Imanga National Marine Conservation Area and the eastern entrance to the Northwest Passage. Environmental Science & Policy, 127, 181-195. Climate change, Marine mammals, Seabirds, Vessel traffic, Underwater noise
Sato, M., Trites, A. W., & Gauthier, S. (2021). Southern resident killer whales encounter higher prey densities than northern resident killer whales during summer. Canadian Journal of Fisheries and Aquatic Sciences, 78(11), 1732-1743. https://doi.org/10.1139/cjfas-2020-0445 Southern resident killer whales, Orcinus orca, Juan de Fuca Strait, availability of prey, prey densities, Northern resident killer whales, Johnstone Strait, ship-based multifrequency echosounders
Vagle, S., Burnham, R. E., O'Neill, C., & Yurk, H. (2021). Variability in anthropogenic underwater noise due to bathymetry and sound speed characteristics. Journal of Marine Science and Engineering, 9(10), 1047. https://doi.org/10.3390/jmse9101047 Anthropogenic noise, passive acoustic monitoring, sound speed profiles, natural variability, ray tracing models, transmission losses, noise mitigation, noise mitigation implications, cetacean conservation, experimental noise source, vessel noise source
Wade, J., Dealy, L., and Grant, P. 2021. Passive Trapping of Western Brook Lamprey (Lampetra richardsoni), Morrison Creek population in 2021. Can. Manuscr. Rep. Fish. Aquat. Sci. 3230: v + 6 p. Lamprey, Morrison Creek, Trapping, Lamptera richardsoni
Charles, K.E., Packham, J. Bureau, D., Lessard, J. 2022. A comparison of underwater photo, video and visual survey methods to assess nearshore algae and invertebrate communities. Can. Tech. Rep. Fish. Aquat. Sci. 3446: vii + 37 p. Nearshore algae, invertebrate species, observation methods, diver observation, video, photographic methods
Wade, J. and P. Grant. 2021. Confirmation of Cowichan Lake Lamprey (Entosphenus macrostomus) Spawning Activity in Mesachie Lake, British Columbia in 2021. Can. Manuscr. Rep. Fish. Aquat. Sci. 3229: v + 7 p. Lamprey, Cowichan Lake Lamprey, Lake Cowichan, Mesachie Lake, Spawning
Mahara N, Alava JJ, Kowal M, Grant E, Boldt JL, Kwong LE, Hunt BPV (2022) Assessing size-based exposure to microplastic particles and ingestion pathways in zooplankton and herring in a coastal pelagic ecosystem of British Columbia, Canada. Mar Ecol Prog Ser 683:139-155. Microplastics, pelagic food web, zooplanktivorous consumers
Anderson, E.D., Tabata, A.T., Zubkowski, T.B. and King, J.R. 2021. Ecosystem-Based Juvenile Pacific Salmon (Oncorhynchus spp.) Trawl Survey off North and West Coast Vancouver Island, British Columbia, October 4 - 17, 2021. Can. Tech. Rep. Fish. Aquat. Sci. 1350: vi + 39 p. Juvenile Pacific salmon, Oncorhynchus, trawl survey, Vancouver Island
Blanken H, Valeo C, Hannah C, Khan UT and Juhász T (2021) A Fuzzy-Based Framework for Assessing Uncertainty in Drift Prediction Using Observed Currents and Winds. Front. Mar. Sci. 8:618094. doi: 10.3389/fmars.2021.618094 Ocean, surface, drift, uncertainty, fuzzy, shear, observations, station papa
Dosser, H. V., Waterman, S., Jackson, J. M., Hannah, C. G., Evans, W., & Hunt, B. P. V. (2021). Stark physical and biogeochemical differences and implications for ecosystem stressors in the northeast pacific coastal ocean. Journal of Geophysical Research. Oceans, 126(11), n/a. https://doi.org/10.1029/2020JC017033 Ecosystem stressors, Bristish Columbia coastal waters, biochemical stressors, "The Blob", pCO2, Queen Charlotte Strait, Strait of Georgia
Haram, L.E., Carlton, J.T., Centurioni, L. et al. Emergence of a neopelagic community through the establishment of coastal species on the high seas. Nat Commun 12, 6885 (2021). https://doi.org/10.1038/s41467-021-27188-6 Neopelagic community, coastal species, high seas, plastic pollution, ecological shift, sea surface community, Tsunami
Hayashida, H., Jin, M., Steiner, N. S., Swart, N. C., Watanabe, E., Fiedler, R., Hogg, A. McC., Kiss, A. E., Matear, R. J., and Strutton, P. G.: Ice Algae Model Intercomparison Project phase 2 (IAMIP2), Geosci. Model Dev., 14, 6847–6861, https://doi.org/10.5194/gmd-14-6847-2021, 2021. Ice algae, sea ice, sea-ice-ocean models, model intercomparison project (MIP), microalgae, polar marine ecosystems, Artic, Antartic
Lüskow, F., Galbraith, M.D., Hunt, B.P.V. et al. Gelatinous and soft-bodied zooplankton in the Northeast Pacific Ocean: Phosphorus content and potential resilience to phosphorus limitation. Hydrobiologia 849, 1543–1557 (2022). https://doi.org/10.1007/s10750-021-04758-9 C:N:P value, Ctenophore, Gastropoda, jellyfish, Salish Sea, Salp, stoichiometry, subarctic, North Pacific
Rosenblum, E., Fajber, R., Stroeve, J. C., Gille, S. T., Tremblay, L. B., & Carmack, E. C. (2021). Surface salinity under transitioning ice cover in the Canada Basin: Climate model biases linked to vertical distribution of fresh water. Geophysical Research Letters, 48, e2021GL094739. https://doi.org/10.1029/2021GL094739 Canada Basin, Artic sea ice, upper ocean salinity, Community Earth Systems Model (CESM), climate model, freshwater
Gartner, H., Norgard, T., Yakgujanaas, J., Rangeley, R., Leith, M., MacIntosh, H., Du Preez, C. 2022. Pacific Seamounts 2018 Expedition Report (Pac2018-103 & NA097). Can. Tech. Rep. Fish. Aquat. Sci. 3460: ix + 147 p Expedition, Offshore Pacific Bioregion, Deep Sea, Seamounts, Multibeam, Oceanography, BOOTS
Commander CJC, Barnett LAK, Ward EJ, Anderson SC, Essington TE. 2022. The shadow model: how and why small choices in spatially explicit species distribution models affect predictions. PeerJ 10:e12783 https://doi.org/10.7717/peerj.12783 Species distribution model, Spatiotemporal model, Distribution shift, Range shift, Time series, Abundance estimation
Babb, D. G., Kirillov, S., Galley, R. J., Straneo, F., Ehn, J. K., Howell, S. E. L., et al. (2021). Sea ice dynamics in Hudson Strait and its impact on winter shipping operations. Journal of Geophysical Research: Oceans, 126, e2021JC018024. https://doi.org/10.1029/2021JC018024 Artic shipping, Hudson Strait, Ice Ridges, Sea ice, Sea ice dynamics, Sea ice thickness, Polynya
Burnham RE, Vagle S, O'Neill C and Trounce K (2021) The Efficacy of Management Measures to Reduce Vessel Noise in Critical Habitat of Southern Resident Killer Whales in the Salish Sea. Front. Mar. Sci. 8:664691. doi: 10.3389/fmars.2021.664691 Salish Sea, southern resident killer whales, critical habitat, vessel exclusion, slowdown, mitigation actions, soundscape monitoring, passive acoustics
Burnham, R. E., Duffus, D. A., & Ross, T. (2021). Remote sensing and mapping habitat features pertinent to fin whale life histories in coastal and offshore waters of vancouver island, british columbia. Journal of Experimental Marine Biology and Ecology, 537, 151511. https://doi.org/10.1016/j.jembe.2021.151511 Preyscape, Critical areas, Fin whales, Ocean gliders, Habitat variables, Passive acoustics
Devred, E., Hilborn, A., & den Heyer, C. E. (2021). Enhanced chlorophyll-a concentration in the wake of sable island, eastern canada, revealed by two decades of satellite observations: A response to grey seal population dynamics? Biogeosciences, 18(23), 6115-6132. https://doi.org/10.5194/bg-18-6115-2021 chlorophyll-a, index of phytoplankton biomass, dissolved organic matter, Sable Island, satellite data analysis, seasonal variations, phytoplankton
Drake, T. W., Hemingway, J. D., Kurek, M. R., Peucker-Ehrenbrink, B., Brown, K. A., Holmes, R. M., et al. (2021). The pulse of the Amazon: Fluxes of dissolved organic carbon, nutrients, and ions from the world's largest river. Global Biogeochemical Cycles, 35, e2020GB006895. https://doi.org/10.1029/2020GB006895 Amazon river, dissolved organic carbon, fluxes, weathering, geochemistry
Kang, S.K., Foreman, M.G.G., Kim, K.O., Kim, E.J., Kim, H., Kang, H.W., Kim, E., Lee, S., Jung, K.T. Numerical Modeling of Tide and Tide-induced Drifting of Particles Released from the Sunken Ship in the Southeastern Yellow Sea, Journal of Coastal Research 114(sp1), 136-140, (6 October 2021). https://doi.org/10.2112/JCR-SI114-028.1 Beach classification, Beach Management, recreational swimming, water safety
Levasseur, L., Brown, K., Langlois, A., McLennan, D. (2021). Measurement of Snow Physical Properties and Stable Isotope Variations in the Canadian Sub-Arctic and Arctic Snowpack, Atmosphere-Ocean, 59:3, 137-151, DOI: 10.1080/07055900.2021.1962240 Water isotopes, Artic snow, snow physics, runoff, open tundra, taiga
Nixon, R. L., Peña, M. A., Taves, R., Janssen, D. J., Cullen, J. T., & Ross, A. R. S. (2021). Evidence for the production of copper-complexing ligands by marine phytoplankton in the subarctic northeast pacific. Marine Chemistry, 237, 104034. https://doi.org/10.1016/j.marchem.2021.104034 Marine phytoplankton, organic ligands, copper, immobilized metal-ion affinity chromatography, Line P, GEOTRACES
Payne, C. M., Bianucci, L., van Dijken, G. L., & Arrigo, K. R. (2021). Changes in under-ice primary production in the Chukchi Sea from 1988 to 2018. Journal of Geophysical Research: Oceans, 126, e2021JC017483. https://doi.org/10.1029/2021JC017483 Chukcki Sea, primary production, under ice blooms, sea ice loss, changing Artic
Steiner, N. S., Bowman, J., Campbell, K., Chierici, M., Eronen-Rasimus, E., Falardeau, M., Flores, H., Fransson, A., Herr, H., Insley, S. J., Kauko, H. M., Lannuzel, D., Loseto, L., Lynnes, A., Majewski, A., Meiners, K. M., Miller, L. A., Michel, L. N., Moreau, S., . . . Wongpan, P. (2021). Climate change impacts on sea-ice ecosystems and associated ecosystem services. Elementa (Washington, D.C.), 9(1), 00007. https://doi.org/10.1525/elementa.2021.00007 Sea-ice ecosystems, ecosystem services, ecologically or biologically significant marine areas (EBSA), polar regions, climate change, Marine Protected Areas (MPA)
Traving, S.J., Kellogg, C.T.E., Ross, T. et al. Prokaryotic responses to a warm temperature anomaly in northeast subarctic Pacific waters. Commun Biol 4, 1217 (2021). https://doi.org/10.1038/s42003-021-02731-9 Marine heatwave, water temperature anomalies, prokaryotes, the "Blob", prokaryotic community composition
Carmack, E., & Vagle, S. (2021). Thermobaric processes both drive and constrain seasonal ventilation in deep Great Slave Lake, Canada. Journal of Geophysical Research: Earth Surface, 126, e2021JF006288. https://doi.org/10.1029/2021JF006288 Deep lakes, seasonal stratification, deep convection, thermobaric instability
Travers-Smith, H., Giannini, F., Sastri, A. R., & Costa, M. (2021). Validation of non-photochemical quenching corrections for chlorophyll-a measurements aboard ships of opportunity. Frontiers in Marine Science, 8. https://doi.org/10.3389/fmars.2021.686750 Non-photochemical-quenching, ships-of-opportunity, chlorophyll-a, fluorescence, in vivo fluorometry, phytoplankton biomass
Venello, T. A., Sastri, A. R., Suchy, K. D., Galbraith, M. D., & Dower, J. F. (2022;2021;). Drivers of variation in crustacean zooplankton production rates differ across regions off the west coast of vancouver island and in the subarctic NE pacific. ICES Journal of Marine Science, 79(3), 741-760. https://doi.org/10.1093/icesjms/fsab236 Biomass production rates, marine zooplankton, the chitobiase method.
Hornby, C. A., Scharffenberg, K., Melling, H., Archambault, P., Dawson, K., Geoffroy, M., Hamilton, A., Henderson, L., Hnatiuk Stewart, S., Holm, J., Hrenchuk, C., Johansen, K. L., Johnson, M. W., Lacho, C., Michel, C., Mosbech, A., Myers, P. G., Nielsen, N., Papakyriakou, T., . . . Canada. Department of Fisheries and Oceans. Central and Arctic Region. (2021). Biophysical and ecological overview of the north water and adjacent areas. Fisheries and Oceans Canada, Canadian Science Advisory Secretariat. Canadian Science Advisory Secretariat (CSAS), Polynya, Strategic Policy, Marine Conservation and Planning, Inuit Qaujimajatuqangit (IQ), Biophysical and Ecological Overview
Pörtner, H.O., Scholes, R.J., Agard, J., Archer, E., Arneth, A., Bai, X., Barnes, D., Burrows, M., Chan, L., Cheung, W.L., Diamond, S., Donatti, C., Duarte, C., Eisenhauer, N., Foden, W., Gasalla, M. A., Handa, C., Hickler, T., Hoegh-Guldberg, O., Ichii, K., Jacob, U., Insarov, G., Kiessling, W., Leadley, P., Leemans, R., Levin, L., Lim, M., Maharaj, S., Managi, S., Marquet, P. A., McElwee, P., Midgley, G., Oberdorff, T., Obura, D., Osman, E., Pandit, R., Pascual, U., Pires, A. P. F., Popp, A., Reyes-García, V., Sankaran, M., Settele, J., Shin, Y. J., Sintayehu, D. W., Smith, P., Steiner, N., Strassburg, B., Sukumar, R., Trisos, C., Val, A.L., Wu, J., Aldrian, E., Parmesan, C., Pichs-Madruga, R., Roberts, D.C., Rogers, A.D., Díaz, S., Fischer, M., Hashimoto, S., Lavorel, S., Wu, N., Ngo, H.T. 2021. Scientific outcome of the IPBES-IPCC co-sponsored workshop on biodiversity and climate change; IPBES secretariat, Bonn, Germany, DOI:10.5281/zenodo.4659158. Climate change, biodiversity, anthropogenic, pollution, biodiversity conservation, climatic driver, direct drivers of biodiversity, biodiversity loss
Pörtner, H.O., Scholes, R.J., Agard, J., Archer, E., Arneth, A., Bai, X., Barnes, D., Burrows, M., Chan, L., Cheung, W.L., Diamond, S., Donatti, C., Duarte, C., Eisenhauer, N., Foden, W., Gasalla, M. A., Handa, C., Hickler, T., Hoegh-Guldberg, O., Ichii, K., Jacob, U., Insarov, G., Kiessling, W., Leadley, P., Leemans, R., Levin, L., Lim, M., Maharaj, S., Managi, S., Marquet, P. A., McElwee, P., Midgley, G., Oberdorff, T., Obura, D., Osman, E., Pandit, R., Pascual, U., Pires, A. P. F., Popp, A., Reyes-García, V., Sankaran, M., Settele, J., Shin, Y. J., Sintayehu, D. W., Smith, P., Steiner, N., Strassburg, B., Sukumar, R., Trisos, C., Val, A.L., Wu, J., Aldrian, E., Parmesan, C., Pichs-Madruga, R., Roberts, D.C., Rogers, A.D., Díaz, S., Fischer, M., Hashimoto, S., Lavorel, S., Wu, N., Ngo, H.T. 2021. IPBES-IPCC co-sponsored workshop report on biodiversity and climate change; IPBES and IPCC, DOI:10.5281/zenodo.4782538 Climate change, biodiversity, biodiversity loss, anthropogenic, pollution, biodiversity conservation, climatic driver, direct drivers of biodiversity, habitable climate
Devred, E., Hardy, M., and Hannah, C. 2021. Satellite observations of the Northeast Pacific Ocean. Can. Tech. Rep. Hydrogr. Ocean Sci. 335: vii + 46 p. Biochemical ocean properties, thermal imaging, satellite-derived chlorophyll-a concentration, sea-surface temperature (SST), northeast Pacific Ocean
Ablain, M., Adusumilli, S., Amarouche, L., Arbic, B., Armitage, T., Arnault, S., Banks, C., Barceló-Llull, B., Basu, S., Bauer-Gottwein, P., Benkiran, M., Blumstein, D., Borde, F., Brasseur, P., Braun, A., Brockley, D., Cancet, M., Cipollini, P., Cosme, E., . . . International Altimetry Team. (2021). Altimetry for the future: Building on 25 years of progress. Advances in Space Research, 68(2), 319-363. https://doi.org/10.1016/j.asr.2021.01.022 Satellite altimetry, oceanography, sea level, coastal oceanography, cryospheric sciences, hydrology
Kovacs, K. M., Citta, J., Brown, T., Dietz, R., Ferguson, S., Harwood, L., Houde, M., Lea, E., Quakenbush, L., Riget, F., Rosing-Asvid, A., Smith, T. G., Svetochev, V., Svetocheva, O., & Lydersen, C. (2021). Variation in body size of ringed seals (pusa hispida hispida) across the circumpolar arctic: Evidence of morphs, ecotypes or simply extreme plasticity? Polar Research, 40, 1-18. https://doi.org/10.33265/polar.v40.5753 Density-dependence, ecology, food availability morphometry, pinniped, phocid seal
Monteiro, C. S., Deconinck, D., Eljasik, P., Sobczak, M., Derycke, S., Panicz, R., Kane, N., Mazloomrezaei, M., Devlin, R. H., & Faria, M. A. (2021). A fast HRMA tool to authenticate eight salmonid species in commercial food products. Food and Chemical Toxicology, 156, 112440-112440. https://doi.org/10.1016/j.fct.2021.112440 Atlantic salmon, Pacific salmon, real-time PCR, DNA barcode, fish authenticity, high resolution melting analysis
Chan, M.T.T., Muttray, A., Sakhrani, D. et al. Sexually Dimorphic Growth Stimulation in a Strain of Growth Hormone Transgenic Coho Salmon (Oncorhynchus kisutch). Mar Biotechnol 23, 140–148 (2021). https://doi.org/10.1007/s10126-020-10012-5 Sexually dimorphic growth, transgenic coho, growth hormone, Metallothionein-B, Estradiol
Devlin, R.H., Supernault, J., Gezan, S.A., Chan, M.T.T., Wetklo, M., Biagi, C.A., Sakhrani, D., Barnetson, S., Dixon, G., Tattersall, E., Davidson, W.S., Koop, B.F., Willis, D.M., Withler, R.E. Environmental and genetic influences on fitness-related traits in a hatchery coho salmon population. Canadian Journal of Fisheries and Aquatic Sciences. 78(7): 852-868. https://doi.org/10.1139/cjfas-2020-0383 Environmental and genetic influences, fitness-related traits, Coho salmon, Oncorhynchus kisutch, Inch Creek, phenotypic traits, heritability, adaptation
Christensen, K.A., Le Luyer, J., Chan, M.T.T., Rondeau, E.B., Koop, B.F., Bernatchez, L., Devlin, R.H. Assessing the effects of genotype-by-environment interaction on epigenetic, transcriptomic, and phenotypic response in a Pacific salmon, G3 Genes|Genomes|Genetics, Volume 11, Issue 2, February 2021, jkab021, https://doi.org/10.1093/g3journal/jkab021 Epigenetics, transcriptome, GxE, transgenic, growth hormone, salmonid
Beacham, T.D. 2021. Parentage-based tagging combined with genetic stock identification is a cost-effective and viable replacement for coded-wire tagging in large-scale assessments of Canadian salmon fisheries. Fisheries Research https://doi.org/10.1016/j.fishres.2021.105920 Genetic stock identification, parentage-based tagging, coded-wire tags, Chinook salmon, Coho salmon, fisheries management
Beacham, T.D., Wallace, C., Jonsen, K., McIntosh, B., Candy, J.R., and Rondeau, E.B. 2021b. Estimation of Conservation Unit and population contribution to Chinook salmon mixed-stock fisheries in British Columbia, Canada using direct DNA sequencing for single nucleotide polymorphisms. Can. J. Fish. Aquat. Sci.. DOI: 10.1139/cjfas-2020-0462 Chinook salmon, mixed-stock fisheries, British-Columbia, direct DNA sequencing, single nucleotide polymorphisms (SNP), Oncorhynchus tshawytscha
Rodriguez-Ezpeleta N, Morissette O, Bean CW, Manu S, Banerjee P, Lacoursière-Roussel A, Beng KC, Alter SE, Roger F, Holman LE, Stewart KA, Monaghan MT, Mauvisseau Q, Mirimin L, Wangensteen OS, Antognazza CM, Helyar SJ, de Boer H, Monchamp ME, Nijland R, Abbott CL, Doi H, Barnes MA, Leray M, Hablützel PI, Deiner K (2021). Trade-offs between reducing complex terminology and producing accurate interpretations from environmental DNA: Comment on "Environmental DNA: What's behind the term?" by Pawlowski et al. (2020). Molecular Ecology 30:4601–4605. Clear terminology, ecological eDNA, extra-organismal DNA, organismal DNA
Hamoutene, D., Hua, K., Lacoursière-Roussel, A., Page, F., Baillie, S. M., Brager, L., Salvo, F., Coyle, T., Chernoff, K., Black, M., Wong, D., Nelson, E., Bungay, T., Gaspard, D., Ryall, E., Mckindsey, C. W., & Sutherland, T. F. (2021). Assessing trace-elements as indicators of marine finfish aquaculture across three distinct canadian coastal regions. Marine Pollution Bulletin, 169, 112557-112557. https://doi.org/10.1016/j.marpolbul.2021.112557 Aquaculture, indicators, trace-metals, footprint, copper, zinc
Inman, S. C., Esquible, J., Jones, M. L., Bechtol, W. R., & Connors, B. (2021). Opportunities and impediments for use of local data in the management of salmon fisheries. Ecology and Society, 26(2), 1. https://doi.org/10.5751/ES-12117-260226 Alaskan salmon, community-based monitoring, co-production of scientific knowledge, natural resource management
Moore, JW, Connors, BM, Hodgson, EE. Conservation risks and portfolio effects in mixed-stock fisheries. Fish Fish. 2021; 22: 1024– 1040. https://doi.org/10.1111/faf.12567 Diversity-stability, ecological portfolio effects, mixed-stock fishery, Pacific salmon, resilience, sustainable fisheries
Price M, Moore J., Connors B.M., Wilson K., and J. Reynolds. 2021. Portfolio simplification arising from a century of change in salmon population diversity and artificial production. Journal of Applied Ecology. https://doi.org/10.1111/1365-2664.13835 Artificial production, biodiversity loss, conservation genetics, fisheries, historical ecology, population diversity, portfolio effects, salmon abundance
Johnson, K.F., A.M. Edwards, A.M. Berger and C.J. Grandin. 2021. Status of the Pacifc Hake (whiting) stock in U.S. and Candian waters in 2021. Prepared by the Joint Technical Committee of the U.S. and Canada Pacific Hake/Whiting Agreement, National Marine Fisheries Service and Fisheries and Oceans Canada. 269 p. Coastal Pacific Hake, Pacific Whiting, Merluccius productus, seasonal migratory behavior, U.S. and Candian waters
Akbarzadeh, A.,Selbie, D.T., Pon, L.B., Miller, K.M. Endangered Cultus Lake sockeye salmon exhibit genomic evidence of hypoxic and thermal stresses while rearing in degrading freshwater lacustrine critical habitat, Conservation Physiology, Volume 9, Issue 1, 2021, coab089, https://doi.org/10.1093/conphys/coab089 Thermal stress, Sockeye salmon, pathogen, hypoxia, Cultus Lake, Biomarker
Jeffries, K. M., Teffer, A., Michaleski, S., Bernier, N. J., Heath, D. D., & Miller, K. M. (2021). The use of non-lethal sampling for transcriptomics to assess the physiological status of wild fishes. Comparative Biochemistry and Physiology b-Biochemistry & Molecular Biology, 256, 110629-110629. https://doi.org/10.1016/j.cbpb.2021.110629 Transcriptional profiling, mRNA, gene expression, transcriptome, environmental stress
Hollarsmith, J A, Therriault, T W, Côté, I M. (2021). Practical implementation of cumulative-effects management of marine ecosystems in western North America. Conservation Biology, 1−12. https://doi.org/10.1111/cobi.13841 Canada, ecosystem-based management, environmental impact assessment, Mexico, multiple stressors, United States
Amos, C.L.; Kassem, H.; Bergamasco, A.; Sutherland, T.F., and Cloutier, D., 2021. The mass settling flux of suspended particulate matter in Venice Lagoon, Italy. Journal of Coastal Research, 37(6), 1099–1116. Coconut Creek (Florida), ISSN 0749-0208. Deposition, particle size, Venice Lagoon, transport, benthic flumes, flocculation, settling rate, suspended aggregates
Rooper, C. N., Ortiz, I., Hermann, A. J., Laman, N., Cheng, W., Kearney, K., and Aydin, K. Predicted shifts of groundfish distribution in the Eastern Bering Sea under climate change, with implications for fish populations and fisheries management. – ICES Journal of Marine Science, doi:10.1093/icesjms/fsaa215. Alaska, climate change, demersal fish, fish habitat, generalized additive modelling, regional ocean model systems, species distribution modelling, trawl surveys
Stienessen, S. C., Rooper, C. N., Webe, T. C., Jones, D. T., Pirtle, J. L., & Wilson, C. D. (2021). Comparison of model types for prediction of seafloor trawlability in the gulf of alaska by using multibeam sonar data. Fishery Bulletin (Washington, D.C.), 119(2-3), 184-196. https://doi.org/10.7755/FB.119.2-3.7 Seafloor trawlability, Gulf of Alaska, multibeam sonar data, rockfish, Sebastes spp., continential shelf, trawlable, untrawlable
Doherty B, Cox SP, Rooper CN, Johnson SDN, Kronlund AR. 2021. Species distribution models for deep-water gorgonian (Alcyonacea) coral habitats that account for spatial uncertainty in trap-camera fishery data. Mar. Ecol. Prog. Ser. 660:69-93. Sensitive benthic habitats, bottom-contact fishing, quantitative risk assessment, presence/ absence data, vulnerable marine ecosystems, seamount
Date modified: