2022 DFO Pacific Science Publications
We are pleased to continue to provide Canadians with the Pacific Region's science publications, and to continue the ongoing communication of high quality research with this list of 2022 Pacific Science Publications. Below you will find primary and secondary peer reviewed publications published in 2022 which involve at least one DFO Science Branch author from the Pacific Region. The links provided to this research are hosted by third party publishers, as such journals may only be available in English.
Title | Keywords |
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Stockdale, J. E., Anderson, S. C., Edwards, A. M., Iyaniwura, S. A., Mulberry, N., Otterstatter, M. C., Janjua, N. Z., Coombs, D., Colijn, C., & Irvine, M. A. (2022). Quantifying transmissibility of SARS-CoV-2 and impact of intervention within long-term healthcare facilities. Royal Society Open Science, 9(1), 211710-211710. https://doi.org/10.1098/rsos.211710 | COVID-19, reproduction number, outbreak modelling, transmissibility, long-term health care |
English, P., E.J. Ward, C.N. Rooper, R.E. Forrest, L.A. Rogers, K.L. Hunter, A.M. Edwards, B.M. Connors, S.C. Anderson. 2021. Contrasting climate velocity impacts in warm and cool locations show that effects of marine warming are worse in already warmer temperate waters. Fish and Fisheries. 23(1) 239–255. https://doi.org/10.1111/faf.12613. | biotic velocity, climate change, context dependence, dissolved oxygen, groundfish, spatio-temporal distribution models |
Robinson, C. L. K., Yakimishyn, J., & Evans, R. (2022). Minimal effects of the 2014-16 marine heatwave on fish assemblages found in eelgrass meadows on the southwestern coast of vancouver island, british columbia, canada. Frontiers in Marine Science, 9https://doi.org/10.3389/fmars.2022.980703 | marine heatwave (MHW), eelgrass (Zostera marina), fish assemblage, control chart, coastal |
Zaiko, A., Greenfield, P., Abbott, C., von Ammon, U., Bilewitch, J., Bunce, M., Cristescu, M. E., Chariton, A., Dowle, E., Geller, J., Ardura Gutierrez, A., Hajibabaei, M., Haggard, E., Inglis, G. J., Lavery, S. D., Samuiloviene, A., Simpson, T., Stat, M., Stephenson, S., Sutherland, J., … Pochon, X. (2022). Towards reproducible metabarcoding data: Lessons from an international cross-laboratory experiment. Molecular ecology resources, 22(2), 519–538. https://doi.org/10.1111/1755-0998.13485 | 18S ribosomal rRNA (18S rRNA), high-throughput sequencing, metabarcoding, mitochondrial cytochrome c oxidase subunit 1 (COI), reproducibility, standardization |
Thompson, P., Anderson, S., Nephin, J., Haggarty, D., Peña, M., English, P., Gale, K., & Rubidge, E. (2022). Disentangling the impacts of environmental change and commercial fishing on demersal fish biodiversity in a northeast pacific ecosystem. Marine Ecology. Progress Series (Halstenbek), 689, 137-154. https://doi.org/10.3354/meps14034 | biodiversity change, environmental change, groundfish, ecosystem-based management, marine spatial planning, temperature, fishing, species richness, community biomass |
Freshwater, C., Parken, C.K., Tucker, S., Velez-Espino, L. A., King, J. (2022). Non-stationary patterns in demographic traits covary with Chinook salmon marine distributions. Canadian Journal of Fisheries and Aquatic Sciences. https://doi.org/10.1139/cjfas-2021-0312 | age-at-maturity, survival, Chinook salmon, population productivity |
Gale, K. S. P., Forrest, R. E., Rooper, C. N., Nephin, J., Wallace, S., Driscoll, J., & Rubidge, E. (2022). Evaluation of collaboratively developed management measures to reduce coral and sponge bycatch in a fully monitored multispecies trawl fishery. Canadian Journal of Fisheries and Aquatic Sciences, 79(9), 1420-1434. https://doi.org/10.1139/cjfas-2021-0274 | vulnerable marine ecosystem, environmental impacts, spatial management, continental shelf |
McLaskey, A. K., Forster, I., Belluz, J. D. B., & Hunt, B. P. (2022). A high-resolution time series of particulate matter fatty acids reveals temporal dynamics of the composition and quality available to zooplankton in a temperate coastal ocean. Progress in Oceanography, 206, 102843. | food quality, nutrition, stable isotopes, phytoplankton, trophic markers, pelagic food web, Canada, British Columbia, Strait of Georgia |
Du Preez, C., Gartner, H., Watts, J., Clark, L., Du Preez, S., & Norgard, T. (2023). Salmon shark (lamna ditropis) scratching behaviour using floating anthropogenic debris. Canadian Field-Naturalist, 136(3), 274-280. https://doi.org/10.22621/cfn.v136i3.2949 | scratching, salmon shark, animal behaviour, changing ocean, parasites, traditional ecological knowledge, drone, shark, Lamna ditropis, marine pollution |
Hunsicker, M. E., Ward, E. J., Litzow, M. A., Anderson, S. C., Harvey, C. J., Field, J. C., Gao, J., Jacox, M. G., Melin, S., Thompson, A. R., & Warzybok, P. (2022). Tracking and forecasting community responses to climate perturbations in the california current ecosystem. PLOS Climate, 1(3), e0000014. https://doi.org/10.1371/journal.pclm.0000014 | marine ecosystems, marine fish, California, fish biology, marine biology, ecosystems, larvae, nitrates |
Essington, T. E., Anderson, S. C., Barnett, L. A. K., Berger, H. M., Siedlecki, S. A., & Ward, E. J. (2022). Advancing statistical models to reveal the effect of dissolved oxygen on the spatial distribution of marine taxa using thresholds and a physiologically based index. Ecography (Copenhagen), 2022(8). https://doi.org/10.1111/ecog.06249 | climate change, distribution shifts, metabolic index, spatial modeling |
Rougemont, Q., Xuereb, A., Dallaire, X., Moore, J.-S., Normandeau, E., Perreault-Payette, A., Bougas, B., Rondeau, E. B., Withler, R. E., Van Doornik, D. M., Crane, P. A., Naish, K. A., Garza, J. C., Beacham, T. D., Koop, B. F., & Bernatchez, L. (2023). Long-distance migration is a major factor driving local adaptation at continental scale in Coho salmon. Molecular Ecology, 32, 542– 559. https://doi.org/10.1111/mec.16339 | long-distance migration, local adaptation, continental scale, Coho salmon, Oncorhynchus kisutch |
Deeg, C. M., Sutherland, B. J. G., Ming, T. J., Wallace, C., Jonsen, K., Flynn, K. L., Rondeau, E. B., Beacham, T. D., & Miller, K. (2022). In‐field genetic stock identification of overwintering coho salmon in the gulf of alaska: Evaluation of nanopore sequencing for remote real‐time deployment. Molecular Ecology Resources, 22(5), 1824-1835. https://doi.org/10.1111/1755-0998.13595 | at-sea, genetic stock identification, mobile, Nanopore, salmon, single nucleotide polymorphism |
Beacham, T. D., Jonsen, K., Sutherland, B. J. G., Ramshaw, B., & Rondeau, E. B. (2022). Parentage-based tagging and genetic stock identification applied to assessment of mixed-stock fisheries and hatchery broodstocks for chinook salmon in british columbia, canada. Fisheries Research, 253, 106369. https://doi.org/10.1016/j.fishres.2022.106369 | Chinook salmon, fishery management, genetic stock identification, mixed-stock fishery, parentage-based tagging |
He, X., Stanley, R. R. E., Rubidge, E. M., Jeffery, N. W., Hamilton, L. C., Westfall, K. M., Gilmore, S. R., Roux, L. D., Gale, K. S. P., Heaslip, S. G., Steeves, R., & Abbott, C. L. (2022). Fish community surveys in eelgrass beds using both eDNA metabarcoding and seining: Implications for biodiversity monitoring in the coastal zone. Canadian Journal of Fisheries and Aquatic Sciences, 79(8), 1335-1346. https://doi.org/10.1139/cjfas-2021-0215 | Environmental DNA (eDNA), eDNA metabarcoding, biodiversity monitoring, coastal eelgrass (Zostera marina), Marine Protected Areas (MPAs) |
Yamada, S. B., Gillespie, G. E., Thomson, R. E., & Norgard, T. C. (2021). Ocean indicators predict range expansion of an introduced species: Invasion history of the european green crab carcinus maenas on the north american pacific coast. Journal of Shellfish Research, 40(2), 399-413. https://doi.org/10.2983/035.040.0212 | European Green Crab, Carcinus maenas, range expansion, Davidson Current, El Niño, Pacific decadal oscillation, invasive species |
Becker, K., Thomson, R.E., Davis, E.E. et al. Geothermal heating and episodic cold-seawater intrusions into an isolated ridge-flank basin near the Mid-Atlantic Ridge. Commun Earth Environ 2, 226 (2021). https://doi.org/10.1038/s43247-021-00297-2 | geothermal heating, episodic cold-seawater intrusions, mid-Atlantic Ridge, geothermal flux |
Zaytsev, O., Rabinovich, A. B., & Thomson, R. E. (2021). The impact of the chiapas tsunami of 8 september 2017 on the coast of mexico. part 1: Observations, statistics, and energy partitioning. Pure and Applied Geophysics, 178(11), 4291-4323. https://doi.org/10.1007/s00024-021-02893-x | 2017 Chiapas earthqake and tsunami, Mexico, Central America, tide gauges, DART, time series analysis, spectra, tsunami parameters, 2010 and 2011 tsunamis |
K.L.E. Berry, S. Hess, T.D. Clark, A.S. Wenger, M.O. Hoogenboom, A.P. Negri. Effects of suspended coal particles on gill structure and oxygen consumption rates in a coral reef fish, Marine Pollution Bulletin, Volume 169, 2021, 112459, ISSN 0025-326X, https://doi.org/10.1016/j.marpolbul.2021.112459 |
gill remodeling, respirometry, pollution |
Freshwater, C., Duguid, W., Juanes, F., & McKinnell, S. (2023). A century-long time series reveals large declines and greater synchrony in nass river sockeye salmon size-at-age. Canadian Journal of Fisheries and Aquatic Sciences, https://doi.org/10.1139/cjfas-2022-0259 | body size, age, time series, sockeye salmon, fecundity |
Proudfoot, B., Robb, C., & Canada. Department of Fisheries and Oceans. Pacific Region. (2022). Geomorphic units in the strait of georgia and southern shelf bioregions. Fisheries and Oceans Canada, Science Branch, Pacific Region, Pacific Biological Station. | Pacific Marine Ecological Classification System, Benthic terrain, Marine Spatial Planning, Continental Shelf, Continental Slope |
Covernton, G. A., Dietterle, M., Pearce, C. M., Gurney-Smith, H. J., Dower, J. F., & Dudas, S. E. (2022). Depuration of anthropogenic particles by pacific oysters (crassostrea gigas): Feasibility and efficacy. Marine Pollution Bulletin, 181, 113886-113886. https://doi.org/10.1016/j.marpolbul.2022.113886 | Crassostrea gigas, depuration, microfibres, microplastics, Pacific oyster, seafood |
Grenier, M., Brown, K. A., Colombo, M., Belhadj, M., Baconnais, I., Pham, V., Soon, M., Myers, P. G., Jeandel, C., & François, R. (2022). Controlling factors and impacts of river-borne neodymium isotope signatures and rare earth element concentrations supplied to the canadian arctic archipelago. Earth and Planetary Science Letters, 578, 117341. https://doi.org/10.1016/j.epsl.2021.117341 | river geochemistry, Rare Earth Elements, neodymium isotopes, bedrock geology, dissolved riverine inputs, Canadian Arctic Archipelago |
Tavares, S. B., Whitehead, H., & Doniol-Valcroze, T. (2022). Assessing social structure: A data-driven approach to define associations between individuals. Mammalian Biology : Zeitschrift Für Säugetierkunde, 102(3), 551-566. https://doi.org/10.1007/s42991-022-00231-9 | social structure, individual association, photo-identification, killer whales, data-driven |
Shartau, R. B., Snyman, H. N., Turcotte, L., McCarron, P., Bradshaw, J. C., & Johnson, S. C. (2022). Acute microcystin exposure induces reversible histopathological changes in chinook salmon (oncorhynchus tshawytscha) and atlantic salmon (salmo salar). Journal of Fish Diseases, 45(5), 729-742. https://doi.org/10.1111/jfd.13599 | microcystins, toxicity, Atlantic Salmon and Chinook Salmon |
Lavery, M. A. K., Rooper, C. N., Sawada, K., Fenske, K., Kulik, V., & Park, K. J. (2023;2022;). Effects of oceanography on north pacific armorhead recruitment in the emperor seamounts. Fisheries Oceanography, 32(2), 160-176. https://doi.org/10.1111/fog.12612 | North Pacific armorhead, oceanography, climate effects, environmental covariates, recruitment, OceanParcels |
Simpson, E., Ianson, D., & Kohfeld, K. E. (2022). Using end-member models to estimate seasonal carbonate chemistry and acidification sensitivity in temperate estuaries. Geophysical Research Letters, 49, e2021GL095579. | ocean acidification, anthropogenic carbon, estuarine sensitivity |
Bateman, A. W., Teffer, A. K., Bass, A., Ming, T., Kaukinen, K., Hunt, B. P. V., Krkošek, M., & Miller, K. M. (2022). Atlantic salmon farms are a likely source of tenacibaculum maritimum infection in migratory fraser river sockeye salmon. Canadian Journal of Fisheries and Aquatic Sciences, 79(8), 1225-1240. https://doi.org/10.1139/cjfas-2021-0164 | epidemiological modes, migration, salmon farms, sockeye salmon, wildlife-livestock interface |
Deeg, C. M., Kanzeparova, A. N., Somov, A. A., Esenkulova, S., Di Cicco, E., Kaukinen, K. H., Tabata, A., Ming, T. J., Li, S., Mordecai, G., Schulze, A., & Miller, K. M. (2022). Way out there: Pathogens, health, and condition of overwintering salmon in the gulf of alaska. Facets (Ottawa), 7, 247-285. https://doi.org/10.1139/facets-2021-0052 | Pacific salmon, Winter, Gulf of Alaska, Pathogens, Stressors |
Proudfoot, B., Robb, C., Rubidge, E., Murray, C. C., & Sweazey, B. (2022). Science workshop report: Spatial data contributions to federal initiatives in the pacific region. (). | Science, Workshop, Marine Spatial Planning (MSP), Data, Initiative |
Schaub, J., McLaskey, A. K., Forster, I., & Hunt, B. P. (2023). Size‐based changes in trophic ecology and nutritional quality of moon jellyfish (Aurelia labiata). Ecosphere, 14(3), e4430. | moon jellyfish, Aurelia labiate, trophic ecology, nutritional quality |
Savoca, M. S., Kühn, S., Sun, C., Avery-Gomm, S., Choy, C. A., Dudas, S., Hong, S. H., Hyrenbach, K. D., Li, T., Ng, C. K., Provencher, J. F., & Lynch, J. M. (2022). Towards a north pacific ocean long-term monitoring program for plastic pollution: A review and recommendations for plastic ingestion bioindicators. Environmental Pollution (1987), 310, 119861-119861. https://doi.org/10.1016/j.envpol.2022.119861 | plastics, indicator, Pacific Ocean |
Jackson, J. M., Johannessen, S., Del Bel Belluz, J., Hunt, B. P. V., & Hannah, C. G. (2022). Correction to: Identification of a seasonal subsurface oxygen minimum in rivers inlet, british columbia. Estuaries and Coasts, 45(3), 920-920. https://doi.org/10.1007/s12237-021-01011-3 | British Columbia, Fjord, Subsurface oxygen minimum, Upwelling, Downwelling, Remineralization |
Thomson, R. E., & Fine, I. (2021). Revisiting the ocean's nonisostatic response to 5-day atmospheric loading: New results based on global bottom pressure records and numerical modeling. Journal of Physical Oceanography, 51(9), 2845-2859. https://doi.org/10.1175/JPO-D-21-0025.1 | Atmosphere-ocean interaction, Barotropic flows, Inertia-gravity waves, Kelvin waves, Ocean dynamics, Planetary waves, Pressure, Rossby waves, Abyssal circulation, Sea level, Ocean models |
Devlin, R. H., Biagi, C. A., Sakhrani, D., Fujimoto, T., Leggatt, R. A., Smith, J. L., & Yesaki, T. Y. (2022). An assessment of hybridization potential between atlantic and pacific salmon. Canadian Journal of Fisheries and Aquatic Sciences, 79(4), 670-676. https://doi.org/10.1139/cjfas-2021-0083 | hybridization, Atlantic salmon, Salmo salar, Pacific salmon, Oncorhynchus, hybrids, salmonids |
Pon, L. B., Lidin, G. W., Selbie, D. T., & Canada. Department of Fisheries and Oceans. Pacific Region. (2022). Hydroacoustic enumerations and trawl surveys of juvenile sockeye salmon (oncorhynchus nerka) in quesnel lake, british columbia between 2010 and 2015. Cultus Lake Salmon Research Laboratory, Science Branch, Pacific Region, Fisheries and Oceans Canada. | hydroacoustic enumerations, trawl surveys, juvenile Sockeye salmon, Oncorhynchus nerka, British Columbia, Quesnel Lake |
Wade, J., & Canada. Department of Fisheries and Oceans. Pacific Region. Pacific Biological Station. (2022). Summary of 2011-2021 trap data for the endangered morrison creek lamprey (lampetra richardsoni). Science Branch, Pacific Region, Fisheries and Oceans Canada, Pacific Biological Station. | Lamprey, Morrison Creek, Trapping, Lamptera richardsoni |
Wilborn, R. E., Spies, I., Goddard, P., Rooper, C. N., & Orr, J. W. (2022). First observation of the use of coral habitat by larval northern rockfish (sebastes polyspinis) in the western gulf of alaska. Fishery Bulletin (Washington, D.C.), 120(1), 74-78. https://doi.org/10.7755/FB.120.1.7 | habitat use, deep-sea corals, rockfish, larval stages, genetic species identification |
Wright-LaGreca, M., Mackenzie, C., & Green, T. J. (2022). Ocean Acidification Alters Developmental Timing and Gene Expression of Ion Transport Proteins During Larval Development in Resilient and Susceptible Lineages of the Pacific Oyster (Crassostrea gigas). Marine Biotechnology, 1-9. | Crassostrea, ocean acidification, larvae, transcriptomics, genetic selection |
Brunt, M. W., Kreiberg, H., & von Keyserlingk, Marina A. G. (2022). Invertebrate research without ethical or regulatory oversight reduces public confidence and trust. Humanities & Social Sciences Communications, 9(1), 1-9. https://doi.org/10.1057/s41599-022-01272-8 | social licence, research animals, ethical oversight, aquatic, terrestrial |
Cuddington, K, Edwards, A.M., and Ingalls, B. (2022). Building Skills in Quantitative Biology. https://www.quantitative-biology.ca | GitHub, R Markdown, Machine Learning, Optimisation, Multivariate Analysis |
Iacarella, J. C., Burke, L., Clyde, G., Wicks, A., Clavelle, T., Dunham, A., Rubidge, E., & Woods, P. (2023). Application of AIS- and flyover-based methods to monitor illegal and legal fishing in canada's pacific marine conservation areas. Conservation Science and Practice, https://doi.org/10.1111/csp2.12926 | aerial surveillance, Automatic Identification System (AIS), conservation area performance, fishing closures, Marine Protected Area (MPA), management effectiveness, non-compliance, vessel tracking |
Li, Y., Ma, S., Fu, C., Li, J., Tian, Y., Sun, P., Ju, P., & Liu, S. (2022). Seasonal differences in the relationship between biodiversity and ecosystem functioning in an overexploited shelf sea ecosystem. Diversity & Distributions, 28(8), 1706-1720. https://doi.org/10.1111/ddi.13521 | biodiversity and ecosystem functioning relationship, demersal fish community, environmental factors, overexploited shelf sea ecosystem, seasonal dynamics, taxonomic and functional diversity |
Edwards, A.M., A.M. Berger, C.J. Grandin and K.F. Johnson. (2022). Status of the Pacifc Hake (whiting) stock in U.S. and Canadian waters in 2022. Joint Technical Committee of the U.S. and Canada Pacifc Hake/Whiting Agreement, National Marine Fisheries Service and Fisheries and Oceans Canada. 1 - 238. https://media.fisheries.noaa.gov/2022-02/2022-hake-assessment-post-srg.pdf | Pacific Hake, stock assessment |
Boldt, J. L., Murphy, H. M., Chamberland, J., Debertin, A., Gauthier, S., Hackett, B., Hagel, P. S., Majewski, A. R., McDermid, J. L., Mérette, D., Robinson, C. L. K., Rooper, C. N., Sherbo, B., Van Beveren, E., & Walkusz, W. (2022). Canada's forage fish: An important but poorly understood component of marine ecosystems. Canadian Journal of Fisheries and Aquatic Sciences, 79(11), 1911-1933. https://doi.org/10.1139/cjfas-2022-0060 | literature mapping, knowledge gaps, pressures, ecosystem role, distribution, forage fish |
Shotwell, S. K., Pirtle, J. L., Watson, J. T., Deary, A. L., Doyle, M. J., Barbeaux, S. J., Dorn, M. W., Gibson, G. A., Goldstein, E. D., Hanselman, D. H., Hermann, A. J., Hulson, P. J. F., Laurel, B. J., Moss, J. H., Ormseth, O. A., Robinson, D., Rogers, L. A., Rooper, C. N., Spies, I., . . . Vollenweider, J. J. (2022). Synthesizing integrated ecosystem research to create informed stock-specific indicators for next generation stock assessments. Deep-Sea Research. Part II, Topical Studies in Oceanography, 198, 105070. https://doi.org/10.1016/j.dsr2.2022.105070 | Ecosystem indicators, ecosystem based fisheries management, integrated ecosystem assessment, next generation stock assessment, recruitment, temperature thresholds |
Guyondet, T., Filgueira, R., Pearce, C. M., Tremblay, R., & Comeau, L. A. (2022). Nutrient-loading mitigation by shellfish aquaculture in semi-enclosed estuaries. Frontiers in Marine Science, 9https://doi.org/10.3389/fmars.2022.909926 | Eutrophication, Nutrient loading, Shellfish aquaculture, Ecosystem services, Estuary model, Climate change |
Evans, R., Gauthier, S., & Robinson, C. L. K. (2022). Ecological considerations for species distribution modelling of euphausiids in the northeast pacific ocean. Canadian Journal of Fisheries and Aquatic Sciences, 79(3), 518-532. https://doi.org/10.1139/cjfas-2020-0481 | CALIFORNIA CURRENT IMPLICATION, HAKE, MERLUCCIUS PRODUCTUS, SOUTH-WEST COAST, EL-NINO, POPULATION BIOLOGY, BRITISH-COLUMBIA, CENTRAL OREGON, INTERANNUAL VARIATIONS, ZOOPLANKTON COMMUNITY, CONSERVATION BIOLOGY |
Bluhm, B. A., Brown, K., Rotermund, L., Williams, W., Danielsen, S., & Carmack, E. C. (2022). New distribution records of kelp in the kitikmeot region, northwest passage, canada, fill a pan-arctic gap. Polar Biology, 45(4), 719-736. https://doi.org/10.1007/s00300-022-03007-6 | Arctic, Kelp, Alaria esculenta, Laminaria solidungula, Saccharina latissima, Northwest Passage, Habitat |
McMillan, C. J., Keppel, E. A., Spaven, L. D., Doniol-Valcroze, T., & Canada. Department of Fisheries and Oceans. Pacific Region. Pacific Biological Station. (2022). Preliminary report on the seasonal abundance and distribution of cetaceans in the southern salish sea in response to TMX recommendations 5 and 6 (year 1). Fisheries and Oceans Canada, Science Branch, Pacific Region, Pacific Biological Station. | Trans Mountain Expansion (TMX), Cetaceans, whales, abundance, distribution |
Barnes, C. L., Essington, T. E., Pirtle, J. L., Rooper, C. N., Laman, E. A., Holsman, K. K., Aydin, K. Y., & Thorson, J. T. (2022). Climate‐informed models benefit hindcasting but present challenges when forecasting species–habitat associations. Ecography (Copenhagen), 2022(10), n/a. https://doi.org/10.1111/ecog.06189 | climate change, forecast skill, generalized additive model, hindcast performance, retrospective skill testing, species distribution model |
Shotwell, S. K., Pirtle, J. L., Watson, J. T., Deary, A. L., Doyle, M. J., Barbeaux, S. J., Dorn, M. W., Gibson, G. A., Goldstein, E. D., Hanselman, D. H., Hermann, A. J., Hulson, P. J. F., Laurel, B. J., Moss, J. H., Ormseth, O. A., Robinson, D., Rogers, L. A., Rooper, C. N., Spies, I., . . . Vollenweider, J. J. (2022). Synthesizing integrated ecosystem research to create informed stock-specific indicators for next generation stock assessments. Deep-Sea Research. Part II, Topical Studies in Oceanography, 198, 105070. https://doi.org/10.1016/j.dsr2.2022.105070 | Ecosystem indicators, ecosystem based fisheries management, integrated ecosystem assessment, next generation stock assessment, recruitment, temperature thresholds |
Garver, K. A., Hawley, L. M., Thiessen, L., Harborne, M., Berdan, C., Lofthouse, D., & Canada. Department of Fisheries and Oceans. Pacific Region. Pacific Biological Station. (2022). Report on the occurrence of infectious hematopoietic necrosis disease in out-migrating sockeye salmon fry at pinkut creek spawning channel in the spring of 2021. Fisheries and Oceans Canada, Pacific Biological Station. | Infectious hematopoietic necrosis virus (IHNV), Sockeye Salmon, Spawning Channel, Babine Lake, Pinkut Creek, Fulton River |
Wiese, F.K.; Nelson, R.J. Pathways between Climate, Fish, Fisheries, and Management: A Conceptual Integrated Ecosystem Management Approach. J. Mar. Sci. Eng. 2022, 10, 338. https://doi.org/10.3390/jmse10030338 | ecosystem management, fisheries, climate change, adaptation, resilience, conceptual model, socio-ecological systems |
Paull, C. K.; Dallimore, S. R.; Jin, Y. K.; Caress, D. W.; Lundsten, E.; Gwiazda, R.; Anderson, K.; Clarke, J. H.; Youngblut, S.; Melling, H., Rapid seafloor changes associated with the degradation of Arctic submarine permafrost. J. Proceedings of the National Academy of Sciences of the United States of America. 2022, 12, 119. https://doi.org/10.1073/pnas.2119105119 | permafrost, Arctic, repeat mapping, pingos, thermokarst |
Charlie, A., Proverbs, T. A., Hodgson, E. E., & Hovel, R. A. (2022). Shifting seasons and threats to harvest, culture, and Self‐Identity: A personal narrative on the consequences of changing climate. Geohealth, 6(12), e2022GH000617-n/a. https://doi.org/10.1029/2022GH000617 | climate change, Indigenous calendars, personal narrative, Arctic |
Mackenzie, C. L., Pearce, C. M., Leduc, S., Roth, D., Kellogg, C. T. E., Clemente-Carvalho, R. B. G., & Green, T. J. (2022). Impacts of seawater pH buffering on the larval microbiome and carry-over effects on later-life disease susceptibility in pacific oysters. Applied and Environmental Microbiology, 88(22), e0165422-e0165422. https://doi.org/10.1128/aem.01654-22 | Carry-over effects, Crassostrea gigas, Ocean acidification buffering, Pacific oyster, Vibrio exposure |
Boyd, L., Grant, P., Lemieux, J., Iacarella, J. C., & Canada. Department of Fisheries and Oceans. Pacific Region. (2022). Cumulative effects of threats on at-risk species habitat in the fraser valley, british columbia. Fisheries and Oceans Canada, Science Branch, Pacific Region, Cultus Lake Laboratory. | cumulative effects, threats, species at risk, salmon, freshwater, habitat |
Thompson, P. L., Nephin, J., Davies, S. C., Park, A. E., Lyons, D. A., Rooper, C. N., Angelica Peña, M., Christian, J. R., Hunter, K. L., Rubidge, E., & Holdsworth, A. M. (2023). Groundfish biodiversity change in northeastern pacific waters under projected warming and deoxygenation. Philosophical Transactions of the Royal Society of London. Series B. Biological Sciences, 378(1881), 20220191-20220191. https://doi.org/10.1098/rstb.2022.0191 | climate change, groundfish, biodiversity, deoxygenation, warming, species distributions, hypoxia, depth |
Burke, L., Clyde, G., Proudfoot, B., Rubidge, E. M., Iacarella, J. C., & Canada. Department of Fisheries and Oceans. Pacific Region. Institute of Ocean Sciences. (2022). Monitoring pacific marine conservation area effectiveness using aerial and RADARSAT-2 (synthetic aperture radar) vessel detection. Fisheries and Oceans Canada, Science Branch, Pacific Region, Institute of Ocean Sciences. | aerial surveillance, RADARSAT-2, Automatic Identification Systems, conservation area performance, fishing closures, Marine Protected Area, management effectiveness, non-compliance, vessel tracking |
Robinson, C. L. K., Bergman, L. C., Allison, M. J., Huard, J., Sutherst, J., & Helbing, C. C. (2022). Application of environmental DNA as a tool for detecting intertidal habitat use by forage fish. Ecological Indicators, 142, 109306. https://doi.org/10.1016/j.ecolind.2022.109306 | Environmental DNA, forage fish, intertidal habitats |
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Behrens Yamada, S., Shanks, A. L., & Thomson, R. E. (2022). Can the timing and duration of planktonic larval development contribute to invasion success? A case study comparing range expansion in the european green crab, carcinus maenas, and the native lined shore crab, pachygrapsus crassipes, in the northeast pacific. Biological Invasions, 24(9), 2917-2932. https://doi.org/10.1007/s10530-022-02820-8 | Range expansion, Larval duration, El Nino, Davidson Current, Pachygrapsus crassipes, Carcinus maenas, Northeast Pacific |
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Stafford, K. M., Melling, H., Moore, S. E., Berchok, C. L., Braen, E. K., Brewer, A. M., & Kimber, B. M. (2022). Marine mammal detections on the chukchi plateau 2009-2020. The Journal of the Acoustical Society of America, 151(4), 2521-2529. https://doi.org/10.1121/10.0010208 | Oceans, Telemetry, Aquatic ecology, Bioacoustics of mammals, Underwater acoustics, Acoustic modeling, simulation and analysis, Acoustic noise, Cryosphere, Oceanography, Acoustic recording |
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Jarníková, T., Ianson, D., Allen, S. E., Shao, A. E., & Olson, E. M. (2022). Anthropogenic carbon increase has caused critical shifts in aragonite saturation across a sensitive coastal system. Global Biogeochemical Cycles, 36, e2021GB007024, https://doi.org/10.1029/2021GB007024 | coastal ocean acidification, carbon cycle, ocean acidification, sub-mesoscale ocean model, anthropogenic carbon, aragonite saturation |
Jones, S. R. M., & Long, A. (2022). Increased prevalence and severity of kudoa thyrsites (cnidaria: Myxosporea) in atlantic salmon salmo salar exposed to deeper seawater. Diseases of Aquatic Organisms, 152, 1-7. https://doi.org/10.3354/dao03702 | Kudoa thyrsites, myxozoa, Atlantic salmon, aquaculture, depth |
Thompson, W. A., Lau, G. Y., Richards, J. G., & Devlin, R. H. (2023). Rationed and satiated growth hormone transgenic coho salmon (oncorhynchus kisutch) show tissue specific differences in energy stores. Comparative Biochemistry and Physiology b-Biochemistry & Molecular Biology, 263, 110781-110781. https://doi.org/10.1016/j.cbpb.2022.110781 | energetics, nutrition, growth hormone, transgenic, coho salmon |
Rousseau, S., Gauthier, S., Neville, C., Johnson, S., & Trudel, M. (2022). Acoustic classification of juvenile pacific salmon (oncorhynchus spp) and pacific herring (clupea pallasii) schools using random forests. Frontiers in Marine Science, 9https://doi.org/10.3389/fmars.2022.857645 | random forest, machine learning, acoustic classification, salmon, herring |
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Pata, P. R., Galbraith, M., Young, K., Margolin, A. R., Perry, R. I., & Hunt, B. P. V. (2022). Persistent zooplankton bioregions reflect long-term consistency of community composition and oceanographic drivers in the NE pacific. Progress in Oceanography, 206, 102849. https://doi.org/10.1016/j.pocean.2022.102849 | Zooplankton, Biogeography, Clustering, Community composition, British Columbia, Northeast (NE) Pacific |
Han, G., Chamberlain, J., Webber, C., & Hannah, C. (2022). A new method of determining glass sponge reef adaptive management zones for the hecate strait and queen charlotte sound marine protected area. Journal of Marine Science and Engineering, 10(7), 971. https://doi.org/10.3390/jmse10070971 | glass sponge reefs, adaptive management zone, sediment transport, currents, marine protected area |
Murchy, K. A., Vagle, S., & Juanes, F. (2022). Anchored bulk carriers have substantial impacts on the underwater soundscape in cowichan bay, british columbia. Marine Pollution Bulletin, 182, 113921-113921. https://doi.org/10.1016/j.marpolbul.2022.113921 | Soundscapes, Shipping noise, Acoustic additions |
Wan, D., Hannah, C. G., Cummins, P. F., Foreman, M. G. G., & Dosso, S. E. (2022). Wind-driven currents in a “wide” narrow channel, with application to Douglas Channel, BC. Journal of Geophysical Research: Oceans, 127, e2021JC017887. https://doi.org/10.1029/2021JC017887 | FJORD, CIRCULATION, SURFACE, MODEL |
Melling, H. (2022). Thickness of multi-year sea ice on the northern canadian polar shelf: A second look after 40 years. The Cryosphere, 16(8), 3181-3197. https://doi.org/10.5194/tc-16-3181-2022 | ARCTIC ARCHIPELAGO, VARIABILITY, TOPOGRAPHY |
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Ma, S., Fu, C., Li, J., Sun, P., Liu, Y., Ye, Z., Watanabe, Y., & Tian, Y. (2023). Non‐stationary effects of multiple drivers on the dynamics of japanese sardine (sardinops melanostictus, clupeidae). Fish and Fisheries (Oxford, England), 24(1), 40-55. https://doi.org/10.1111/faf.12708 | Japanese sardine, non-stationary effects, density-dependence, climate, fishing, northwestern Pacific |
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Johannessen, S. C. (2022). How can blue carbon burial in seagrass meadows increase long-term, net sequestration of carbon? A critical review. Environmental Research Letters, 17(9), 93004. https://doi.org/10.1088/1748-9326/ac8ab4 | blue carbon, seagrass meadows, sediment, organic carbon, climate change, mitigation, regional differences |
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Burnham, R., Vagle, S., Van Buren, P., & Morrison, C. (2022). Spatial impact of recreational-grade echosounders and the implications for killer whales. Journal of Marine Science and Engineering, 10(9), 1267. https://doi.org/10.3390/jmse10091267 | echosounders, acoustic additions, spatial extent, water column profile, southern resident killer whales |
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Lin, Y., Dunphy, M., Krassovski, M. V., Blanken, H., Hourston, R. A. S., & Canada. Department of Fisheries and Oceans. Pacific Region. Institute of Ocean Sciences. (2022). Preliminary development of a relocatable ocean model system for the west coast of canada: A summary of OPP FA5 modeling. Institute of Ocean Sciences, Fisheries and Oceans Canada. | Relocatable, Ocean Model, West Coast of Canada, Ocean Protection Plan, Marine Emergency |
Franco, A. C., Kim, H., Frenzel, H., Deutsch, C., Ianson, D., Sumaila, U. R., & Tortell, P. D. (2022). Impact of warming and deoxygenation on the habitat distribution of Pacific halibut in the Northeast Pacific. Fisheries Oceanography, 1– 14. https://doi.org/10.1111/fog.12610 | Metabolic index, oxygen demand, ocean warming, Pacific halibut, Regional Ocean Modeling System (ROMS), Subarctic Pacific |
Wade, J., Grant, P., & Canada. Department of Fisheries and Oceans. Pacific Region. Institute of Ocean Sciences. (2022). Opportunistic observations of nest building and spawning of the endangered western brook lamprey, morrison creek population (lampetra richardsoni). Science Branch, Pacific Region, Fisheries and Oceans Canada, Institute of Ocean Sciences. | nest building, spawning, endangered Western Brook Lamprey, Morrison Creek, Lampetra richardsoni |
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Li, X., Yang, J., Wang, J., & Han, G. (2022). Evaluation and calibration of remotely sensed high winds from the HY-2B/C/D scatterometer in tropical cyclones. Remote Sensing (Basel, Switzerland), 14(18), 4654. https://doi.org/10.3390/rs14184654 | SURFACE WIND, DECISION TREES, RANDOM FOREST, OCEAN WINDS, VALIDATION, RETRIEVAL, MISSION |
Johannessen, S. C., & Blais, J. M. (2022). Robie W. macdonald, OC, FRSC (1947–2022). Facets (Ottawa), 7, 1276-1280. https://doi.org/10.1139/facets-2022-0131 | CONTAMINATION, TRANSPORT, STRAIT, WATER |
Robinson, C., Bertram, D., Shannon, H., von Biela, V., Greentree, W., Duguid, W., & Arimitsu, M. (2023). Reduction in overwinter body condition and size of pacific sand lance has implications for piscivorous predators during marine heatwaves. Marine Ecology. Progress Series (Halstenbek), HEAThttps://doi.org/10.3354/meps14257 | Forage fish, Pacific Sand Lance, Climate warming, Ammodytes personatus, Ocean warming, Haro Strait, Marine birds, otoliths |
Sutherland, T. F., Mak, M. S. Y., Galvao, M. A., Sterling, A. M., O'Brien, C. S. B., Hoyle, M. A., Cole, L., Mortimor, J., Covert, P. A., & Canada. Department of Fisheries and Oceans. Pacific Region. (2022). Epifaunal diversity on dockside surface perimeters in burrard inlet and fraser river delta, british columbia, canada. Fisheries and Oceans Canada, Science Branch - Pacific Region, Ecosystem Science Division, Pacific Science Enterprise Centre. | epifaunal diversity, dockside, Burrard Inlet, Fraser River Delta, British Columbia, Canada |
Loudon, K. C., Pon, L. B., Block, G. S., Lidin, G. W., Selbie, D. T., Canada. Department of Fisheries and Oceans. Pacific Region Cultus Lake Salmon Research Laboratory, & Canada. Department of Fisheries and Oceans. Pacific Region. Cultus Lake Salmon Research Laboratory. (2022). Anthropogenic degradation of endangered coastrange sculpin (cottus aleuticus, cultus lake population) critical habitat: Nutrient and climatic stresses threaten the persistence of multiple species at risk in cultus lake, british columbia. Cultus Lake Salmon Research Laboratory, Science Branch, Pacific Region, Fisheries and Oceans Canada. | Cultus Pygmy Sculpin, eutrophication, climate warming |
Cunningham, D. S., Braun, D. C., Moore, J. W., & Martens, A. M. (2023). Forestry influences on salmonid habitat in the north thompson river watershed, british columbia. Canadian Journal of Fisheries and Aquatic Sciences, https://doi.org/10.1139/cjfas-2022-0255 | Forestry, riparian habitat, freshwater habitat, salmonids, stream temperature |
Owens, P. N., Petticrew, E. L., Albers, S. J., French, T. D., Granger, B., Laval, B., Lindgren, J., Sussbauer, R., & Vagle, S. (2023). Annual pulses of copper-enriched sediment in a north american river downstream of a large lake following the catastrophic failure of a mine tailings storage facility. The Science of the Total Environment, 856(Pt 1), 158927-158927. https://doi.org/10.1016/j.scitotenv.2022.158927 | Mine tailings, Mount Polley mine, Contaminant fluxes, Downstream impacts, Quesnel River, Salmon habitat |
Jarníková, T., Olson, E. M., Allen, S. E., Ianson, D., & Suchy, K. D. (2022). A clustering approach to determine biophysical provinces and physical drivers of productivity dynamics in a complex coastal sea. Ocean Science, 18(5), 1451-1475. https://doi.org/10.5194/os-18-1451-2022 | biophysical ocean model, cluster-based model, biophysical provinces, productivity dynamics, coastal sea |
Hilborn, A., & Devred, E. (2022). Delineation of eastern beaufort sea sub-regions using self-organizing maps applied to 17 years of MODIS-aqua data. Frontiers in Marine Science, 9https://doi.org/10.3389/fmars.2022.912865 | ocean colour, Beaufort Sea, chlorophyll-a concentration, suspended particulate matter, sea surface temperature, biogeochemical regions |
Sora, K. J., Wabnitz, C. C. C., Steiner, N. S., Sumaila, U. R., Cheung, W. W. L., Niemi, A., Loseto, L. L., & Hoover, C. (2022). Evaluation of the beaufort sea shelf structure and function in support of the tarium niryutait marine protected area. Arctic Science, 8(4), 1252-1275. https://doi.org/10.1139/as-2020-0040 | ecosystem modeling, Arctic, climate change, keystone species, ecosystem-based management |
Amiraux, R., Amyot, M., Archambault, P., Artigue, L., Barbedo de Freitas, L., Bécu, G., Bélanger, S., Bourgain, P., Bricaud, A., Brouard, E., Brunet, C., Burgers, T., Caleb, D., Claustre, H., Cornet-Barthaux, V., Cusa, M., Cusset, F., Dadaglio, L., Davelaar, M., . . . Babin, M. (2022). The green edge cruise: Investigating the marginal ice zone processes during late spring and early summer to understand the fate of the arctic phytoplankton bloom. Earth System Science Data, 14(10), 4607-4642. https://doi.org/10.5194/essd-14-4607-2022 | Arctic, phytoplankton, phytoplankton bloom, marginal ice zone |
Ommer, R. E., & Perry, R. I. (2022). The importance of complexities of scale and context in fisheries research and management. ICES Journal of Marine Science, 79(8), 2196-2203. https://doi.org/10.1093/icesjms/fsac156 | space, time, institution, interaction, knowledge, motivation |
Granger, B., Laval, B., Vagle, S., Petticrew, E. L., Owens, P. N., & Baldwin, S. A. (2022). Initial distribution and interannual decrease of suspended sediment in a Two‐Basin lake following a massive mine tailings spill: Quesnel lake, BC, canada. Water Resources Research, 58(5), n/a. https://doi.org/10.1029/2021WR030574 | sediment, Quesnel Lake, spill, mine waste, British Columbia, Quesnel River, two-basin system |
Manning, C. C. M., Zheng, Z., Fenwick, L., McCulloch, R. D., Damm, E., Izett, R. W., Williams, W. J., Zimmermann, S., Vagle, S., & Tortell, P. D. (2022). Interannual variability in methane and nitrous oxide concentrations and Sea‐Air fluxes across the north american arctic ocean (2015–2019). Global Biogeochemical Cycles, 36(4), n/a. https://doi.org/10.1029/2021GB007185 | interannual variability, sea-air fluxes, North American Artic Ocean, Methane (CH4), Nitrous Oxide (N2O) |
Lotze, H. K., Mellon, S., Coyne, J., Betts, M., Burchell, M., Fennel, K., Dusseault, M. A., Fuller, S. D., Galbraith, E., Garcia Suarez, L., de Gelleke, L., Golombek, N., Kelly, B., Kuehn, S. D., Oliver, E., MacKinnon, M., Muraoka, W., Predham, I. T. G., Rutherford, K., . . . Kienast, M. (2022). Long-term ocean and resource dynamics in a hotspot of climate change. Facets (Ottawa), 7, 1142-1184. https://doi.org/10.1139/facets-2021-0197 | SEA-SURFACE TEMPERATURE, NORTH-ATLANTIC, SCOTIAN SHELF, CONTINENTAL-MARGINGADUS-MORHUA, COASTAL, GULF, COD, FISHERIES, VARIABILITY |
Simond, A. É., Noël, M., Loseto, L., Houde, M., Kirk, J., Elliott, A., & Brown, T. M. (2022). A multi-matrix metabolomic approach in ringed seals and beluga whales to evaluate contaminant and climate-related stressors. Metabolites, 12(9), 813. https://doi.org/10.3390/metabo12090813 | metabolites, ringed seals, beluga whales, mercury, organohalogens, climate change |
Burd, B. J., & Thomson, R. E. (2022). A review of zooplankton and deep carbon fixation contributions to carbon cycling in the dark ocean. Journal of Marine Systems, 236, 103800. https://doi.org/10.1016/j.jmarsys.2022.103800 | Deep sea, Primary production, Zooplankton biomass, Chemosynthetic production, Marine carbon cycle |
Juhls, B., Matsuoka, A., Lizotte, M., Bécu, G., Overduin, P. P., El Kassar, J., Devred, E., Doxaran, D., Ferland, J., Forget, M. H., Hilborn, A., Hieronymi, M., Leymarie, E., Maury, J., Oziel, L., Tisserand, L., Anikina, D. O. J., Dillon, M., & Babin, M. (2022). Seasonal dynamics of dissolved organic matter in the mackenzie delta, canadian arctic waters: Implications for ocean colour remote sensing. Remote Sensing of Environment, 283, 113327. https://doi.org/10.1016/j.rse.2022.113327 | Satellite ocean colour remote sensing, Dissolved organic matter, Mackenzie River, Beaufort Sea, Sentinel-3 OLCI, Land-ocean fluxes |
Burnham, R., Vagle, S., Van Buren, P., & Morrison, C. (2022). Spatial impact of recreational-grade echosounders and the implications for killer whales. Journal of Marine Science and Engineering, 10(9), 1267. https://doi.org/10.3390/jmse10091267 | echosounders, acoustic additions, spatial extent, water column profile, southern resident killer whales |
Perry, R. I., Brown, R. M., & Bychkov, A. (2022). Timothy R. parsons (1932–2022): Building a holistic vision of the marine sciences. Limnology and Oceanography Bulletin, 31(4), 120-122. https://doi.org/10.1002/lob.10520 | Professor Timothy R. Parsons, eminent marine scientist, G. Evelyn Hutchinson Medal, holistic vision, marine ecosystem structure |
Frouin-Mouy, H., Mouy, X., Pilkington, J., Kusel, E., Nichol, L., Doniol-Valcroze, T., & Lee, L. (2022). Acoustic and visual cetacean surveys reveal year-round spatial and temporal distributions for multiple species in northern british columbia, canada. Scientific Reports, 12(1), 19272-19272. https://doi.org/10.1038/s41598-022-22069-4 | Marine biology, animal migration, ecology |
Cheeseman, T., Southerland, K., Acebes, J. M., Audley, K., Barlow, J., Bejder, L., ... & Clapham, P. (2023). (Almost) all the humpback whales of the North Pacific: A collaborative and comprehensive photo-ID dataset. | humpback whales, North Pacific Ocean, photo-ID, photographic identification, Megaptera novaeangliae |
Halliday, W. D., Le Baron, N., Citta, J. J., Dawson, J., Doniol-Valcroze, T., Ferguson, M., ... & Insley, S. J. (2022). Overlap between bowhead whales (Balaena mysticetus) and vessel traffic in the North American Arctic and implications for conservation and management. Biological Conservation, 276, 109820. | Automatic Identification System (AIS), Bering-Chukchi-Beaufort, Cetacean Conservation, Eastern Canada-West Greenland, Ship strikes, Vessel strikes |
Rosen, S., Bianucci, L., Jackson, J. M., Hare, A., Greengrove, C., Monks, R., Bartlett, M., & Dick, J. (2022). Seasonal near-surface hypoxia in a temperate fjord in clayoquot sound, british columbia. Frontiers in Marine Science, 9https://doi.org/10.3389/fmars.2022.1000041 | dissolved oxygen (DO), hypoxia, fjord, Herbert Inlet, Clayoquot Sound, British Columbia (BC) |
Huang, T., Ma, J., Song, S., Ling, Z., Macdonald, R. W., Gao, H., Tao, S., Shen, H., Zhao, Y., Liu, X., Tian, C., Li, Y., Jia, H., Lian, L., & Mao, X. (2022). Health and environmental consequences of crop residue burning correlated with increasing crop yields midst india's green revolution. NPJ Climate and Atmospheric Science, 5(1), 1-9. https://doi.org/10.1038/s41612-022-00306-x | POLYCYCLIC AROMATIC-HYDROCARBONS, LONG-RANGE TRANSPORT, CANADIAN PRAIRIES, GANGETIC PLAIN, LINDANE USAGE, ISOMER-RATIOS, GREAT-LAKES, AMBIENT AIREMISSIONS, BIOMASS |
Howatt, T., Ross, T., & Waterman, S. (2022). Canyon downwelling and water mass influences on winter zooplankton distributions in the coastal northeast pacific. Journal of Geophysical Research. Oceans, 127(11), n/a. https://doi.org/10.1029/2022JC018540 | submarine canyons, winter conditions, water mass variability, bio-physical interactions, zooplankton acoustics, ocean gliders |
Davies, S., Thompson, P., Gomez, C., Nephin, J., Knudby, A., Park, A., ... & Hunter, K. (2022). Addressing uncertainty when projecting marine species distributions under climate change. | Ecosystem management, environmental change, fisheries management, future climate, habitat stability |
Donnet, S., Lazure, P., Ratsimandresy, A., & Han, G. (2022). The physical oceanography of fortune bay, an overview. Regional Studies in Marine Science, 56https://doi.org/10.1016/j.rsma.2022.102698 | Broad fjord, Hydrographic climate, Wind, Tides, Circulation, Along-shore current pulses, Water exchanges |
Thompson, P. L., Rooper, C. N., Nephin, J., Park, A. E., Christian, J. R., Davies, S. C., Hunter, K., Lyons, D. A., Peña, M. A., Proudfoot, B., Rubidge, E. M., & Holdsworth, A. M. (2023). Response of pacific halibut (hippoglossus stenolepis) to future climate scenarios in the northeast pacific ocean. Fisheries Research, 258, 106540. https://doi.org/10.1016/j.fishres.2022.106540 | Climate change, Species distribution, Pacific Halibut, Spatio temporal model, Oxygen limitation |
Perry, R. I. (2023). In Memoriam: Timothy R. Parsons (1932–2022). Fisheries Oceanography, 32( 1), 10– 14. https://doi.org/10.1111/fog.12617 | Timothy R. Parsons, founding editor, Fisheries Oceanography, holistic vision |
Barnett, L. A., Ward, E. J., & Anderson, S. C. (2021). Improving estimates of species distribution change by incorporating local trends. Ecography, 44(3), 427-439. | Species distribution modeling, spatial modelling, survey index standardization |
Brodie, S., Smith, J. A., Muhling, B. A., Barnett, L. A. K., Carroll, G., Fiedler, P., Bograd, S. J., Hazen, E. L., Jacox, M. G., Andrews, K. S., Barnes, C. L., Crozier, L. G., Fiechter, J., Fredston, A., Haltuch, M. A., Harvey, C. J., Holmes, E., Karp, M. A., Liu, O. R., … Kaplan, I. C. (2022). Recommendations for quantifying and reducing uncertainty in climate projections of species distributions. Global Change Biology, 28, 6586– 6601. https://doi.org/10.1111/gcb.16371 | artificial intelligence, climate change, Earth System Models, extrapolation, fisheries, machine |
Wilson, S. M., Patterson, D. A., & Moore, J. W. (2022). Intra- and inter-population variation in sensitivity of migratory sockeye salmon smolts to phenological mismatch. Marine Ecology. Progress Series (Halstenbek), 692, 119-136. https://doi.org/10.3354/meps14070 | match-mismatch hypothesis, sensitivity, migration, phenology, salmon, trait variation |
Doherty, B., Cox, S. P., Rooper, C. N., Johnson, S. D. N., & Kronlund, A. R. (2021). Species distribution models for deep-water coral habitats that account for spatial uncertainty in trap-camera fishery data. Marine Ecology. Progress Series (Halstenbek), 660, 69-93. https://doi.org/10.3354/meps13564 | Sensitive benthic habitats, bottom-contract fishing, quantitative risk assessment, presence/absence data, vulnerable marine ecosystems, seamount |
Stienessen, S. C., Rooper, C. N., Webe, T. C., Jones, D. T., Pirtle, J. L., & Wilson, C. D. (2021). Comparison of model types for prediction of seafloor trawlability in the gulf of alaska by using multibeam sonar data. Fishery Bulletin (Washington, D.C.), 119(2-3), 184-196. https://doi.org/10.7755/FB.119.2-3.7 | seafloor trawlability, Gulf of Alaska, multibeam sonar, trawlable, untrawlable, rockfish, Sebastes |
Rooper, C. N., Ortiz, I., Hermann, A. J., Laman, N., Cheng, W., Kearney, K., & Aydin, K. (2021). Predicted shifts of groundfish distribution in the eastern bering sea under climate change, with implications for fish populations and fisheries management. ICES Journal of Marine Science, 78(1), 220-234. https://doi.org/10.1093/icesjms/fsaa215 | Alaska, climate change, demersal fish, fish habitat, generalized additive modeling, regional ocean model systems, species distrbituion modeling, trawl surveys |
Robichaud, D., Haggarty, D. R., & Canada. Department of Fisheries and Oceans. Pacific Region. (2022). Comparison of rockfish and lingcod catch estimates from internet recreational effort and catch (iREC) and creel surveys. Fisheries and Oceans Canada, Pacific Biological Station. | Recreational catch monitoring, rockfish, Lingcod |
Hodgdon, C. T., Khalsa, N. S., Mazur, M. D., & Chen, Y. (2022). Climate-driven changes in growth and size at maturity of gulf of maine lobster stocks: Implications for stock assessment models. Fishery Bulletin (Washington, D.C.), 120(3-4), 240-251. https://doi.org/10.7755/FB.120.3-4.5 | lobster, stock assessment, climate change |
Khalsa, N. S., Hodgdon, C. T., Mazur, M. D., & Chen, Y. (2023). Climate-driven shifts in growth and maturity induce changes to the population and fishery dynamics of a high-value crustacean. Fisheries Research, 259, 106574. https://doi.org/10.1016/j.fishres.2022.106574 | lobster, growth, maturity, climate change |
Mazur, M. D., Jesse, J., Cadrin, S. X., Truesdell, S. B., & Kerr, L. (2023). Consequences of ignoring climate impacts on new england groundfish stock assessment and management. Fisheries Research, 262, 106652. https://doi.org/10.1016/j.fishres.2023.106652 | Climate change, stock assessment, management strategy evaluation, harvest control rules, groudfish |
Friedland, K. D., Smoliński, S., & Tanaka, K. R. (2021). Contrasting patterns in the occurrence and biomass centers of gravity among fish and macroinvertebrates in a continental shelf ecosystem. Ecology and Evolution, 11(5), 2050-2063. https://doi.org/10.1002/ece3.7150 | center of gravity, Northeast US Large Marine Ecosystem, random forest, temperature |
Cornthwaite, A. M., King, J. R., Bresch, M. J., Granum, L. J., & Canada. Department of Fisheries and Oceans. Pacific Region. Pacific Biological Station. (2022). Pacific spiny dogfish (squalus suckleyi) longline survey in the strait of georgia, october 2-13, 2014. Fisheries and Oceans Canada, Science Branch, Pacific Region, Pacific Biological Station. | Pacific Spiny Dogfish, Strait of Georgia, Stock Assessment, Index, Catch Rate |
Planas, J. V., Rooper, C. N., & Kruse, G. H. (2023). Integrating biological research, fisheries science and management of pacific halibut (hippoglossus stenolepis) across the north pacific ocean. Fisheries Research, 259, 106559. https://doi.org/10.1016/j.fishres.2022.106559 | Pacific halibut, management, research, special issue |
Herder, E. C., Bureau, D., Bigg, M. I., & Canada. Department of Fisheries and Oceans. Pacific Region. (2022). Surveys for olympia oysters (ostrea lurida carpenter, 1864) at six index sites in british columbia — 2010 to 2021. Fisheries and Oceans Canada, Science Branch, Pacific Region, Pacific Biological Station. | Olympia oysters, Ostrea lurida, British Columbia, species-at-risk, population density |
Ward, E. J., Barnett, L. A. K., Anderson, S. C., Commander, C. J. C., & Essington, T. E. (2022). Incorporating non-stationary spatial variability into dynamic species distribution models. ICES Journal of Marine Science, 79(9), 2422-2429. https://doi.org/10.1093/icesjms/fsac179 | extremes, groundfish, non-stationarity, spatially explicit models, variability |
Lindmark, M., Anderson, S. C., Gogina, M., & Casini, M. (2022). Evaluating drivers of spatiotemporal individual condition of a bottom-associated marine fish. (). Cold Spring Harbor: Cold Spring Harbor Laboratory Press. https://doi.org/10.1101/2022.04.19.488709 | Le Cren's condition factor, spatial analysis, spatio-temporal model, density dependence, deoxygeneration, species distribution models |
Gemmell, O.M. (2022) Presence-only species distribution modelling practices produce biased predictions for Alcyonacean corals on British Columbia's continental shelf and slope. [Master of Resource Management Thesis, Simon Fraser University] Simon Fraser University. | Presence-only, bias, species distribution models, sensitive benthic habitats |
Poitevin, P., Lazure, P., Roy, V., Donnet, S., & Chauvaud, L. (2022). The 18.6-year lunar nodal cycle may affect ecosystems on the northwest atlantic continental shelves. Journal of Marine Systems, 235, 103783. https://doi.org/10.1016/j.jmarsys.2022.103783 | Arctica islandica, Tides, Northwestern Atlantic continental shelf, Sclerochronology, Growth |
Garzke, J., Forster, I., Godwin, S. C., Johnson, B. T., Krkosek, M., Mahara, N., Pakhomov, E. A., Rogers, L. A., & Hunt, B. P. (2022). Dynamic coastal pelagic habitat drives rapid changes in growth and condition of juvenile sockeye salmon (oncorhynchus nerka) during early marine migration. Facets (Ottawa), 7, 1328-1347. https://doi.org/10.1139/facets-2022-0068 | fatty acids, RNA/DNA, zooplankton biomass, environmental variation, compensatory growth, zooplankton species composition |
Iacarella JC, Burke L, Clyde G, et al. Monitoring temporal and spatial trends of illegal and legal fishing in marine conservation areas across Canada's three oceans. Conservation science and practice. 2023;5:n/a. | Automatic Identification System (AIS), conservation area performance, fishing closures, fishing displacement, management effictiveness, Marine Protected Area (MPA), non-compliance, vessel tracking |
Boldt, J. L., Murphy, H. M., Chamberland, J., Debertin, A., Gauthier, S., Hackett, B., Hagel, P. S., Majewski, A. R., McDermid, J. L., Mérette, D., Robinson, C. L. K., Rooper, C. N., Sherbo, B., Van Beveren, E., & Walkusz, W. (2022). Canada's forage fish: An important but poorly understood component of marine ecosystems. Canadian Journal of Fisheries and Aquatic Sciences, 79(11), 1911-1933. https://doi.org/10.1139/cjfas-2022-0060 | environmental monitoring, ports, cumultiave effects, |
Brown, N. E. M., & Therriault, T. W. (2022). The hidden risk of keystone invaders in canada: A case study using nonindigenous crayfish. Canadian Journal of Fisheries and Aquatic Sciences, 79(9), 1479-1496. https://doi.org/10.1139/cjfas-2021-0245 | Alien Invasive Species (AIS), crayfish, risk assessment |
Orobko, M., Curren, G., Therriault, T. W., Lawton, P., Fanning, L., & Côté, I. M. (2022). Perception and consideration of cumulative effects and multiple stressors by marine managers in canada. Marine Policy, 143, 105122. https://doi.org/10.1016/j.marpol.2022.105122 | cumulative effects, multiple stressors, ocean mangement, marine conservation, survey |
Curren, G., Fanning, L., Lawton, P., Orobko, M., Côté, I. M., & Therriault, T. W. (2022). Challenges to incorporating social and economic factors into cumulative effects assessments in Canada’s marine conservation areas. Ecology and Society, 27(2), 35. https://doi.org/10.5751/ES-13342-270235 | ocean management, survey, cumulative effects, marine conservation |
Hollarsmith, J. A., Andrews, K., Naar, N., Starko, S., Calloway, M., Obaza, A., Buckner, E., Tonnes, D., Selleck, J., & Therriault, T. W. (2022). Toward a conceptual framework for managing and conserving marine habitats: A case study of kelp forests in the salish sea. Ecology and Evolution, 12(1), e8510-n/a. https://doi.org/10.1002/ece3.8510 | marine conservation, kelp, decision support, framework |
Westfall, K. M., Therriault, T. W., & Abbott, C. L. (2022). Targeted next‐generation sequencing of environmental DNA improves detection of invasive european green crab (carcinus maenas). Environmental DNA (Hoboken, N.J.), 4(2), 440-452. https://doi.org/10.1002/edn3.261 | eDNA, European Green Crab, Automatic Identification System (AIS) |
Ferrario, F., Araujo, C. A. S., Belanger, S., Bourgault, D., Carriere, J., Carrier-Belleau, C., Dreujou, E., Johnson, L. E., Juniper, S. K., Mabit, R., McKindsey, C. W., Ogston, L., Picard, M. M. M., Saint-Louis, R., Saulnier-Talbot, E., Shaw, J., Templeman, N., Therriault, T. W., Tremblay, J., & Archambault, P. (2022). Holistic environmental monitoring in ports as an opportunity to advance sustainable development, marine science, and social inclusiveness. Elementa (Washington, D.C.), 10(1)https://doi.org/10.1525/elementa.2021.00061 | environmental monitoring, ports, cumultiave effects |
Sutherland, T. F., Amos, C. L., & Grant, J. (2022). The resuspension and deposition of biomediated sediments in upper south cove, nova scotia, canada. Journal of Coastal Research, 38(1), 19-34. https://doi.org/10.2112/JCOASTRES-D-20-00104.1 | Sediment resuspension, deposition, biofilm, flume, flux |
Sutherland, T. F., Guyondet, T., Filgueira, R., Krassovski, M. V., Foreman, M. G. G., Canada. Department of Fisheries and Oceans. Pacific Region, & Canadian Science Advisory Secretariat. (2022). Monitoring methods to support area-based bivalve aquaculture management in the pacific region. Fisheries and Oceans Canada, Canadian Science Advisory Secretariat. | Ecosystem, monitor, methods, benthos, oceanography, aquaculture area-based |
Guyondet, T., Krassovski, M. V., Sutherland, T. F., Foreman, M. G. G., Filgueira, R., Canada. Department of Fisheries and Oceans. Pacific Region, & Canadian Science Advisory Secretariat. (2022). An ecological carrying capacity assessment for shellfish aquaculture in baynes sound, british columbia. Fisheries and Oceans Canada, Canadian Science Advisory Secretariat. | Shellfish, aquaculture, management, ecological, carrying capacity, phytoplankon, impact |
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